Gene PA14_24400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_24400 
Symbol 
ID4384104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2125225 
End bp2126247 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID639324522 
Productvon Willebrand factor type A domain-containing protein 
Protein accessionYP_790101 
Protein GI116051069 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0690216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGT TCGCCTGGCC CTGGGTCTTC GCCCTCGCCC CGTTGCCCTG GCTGCTGCGC 
CTGGTGCTGC CGGCCGCCGA CAGCGGCGAG GCGGCGCTCA AGGTGAGCTT CCTCGACGAA
CTCGAAAGCC TCGCCGGACG CCGTGCCCGC GCACGCCTGC CGGCCTGGCG GCAGCAGGTG
CGCTTCGCCC TGCTCTGGTT CCTCCTGCTG CTCGCCGCGG CCCGCCCGCA GTGGGTCGGC
GAACCCCTGC CGCTACCCGC CAGCGGCCGT GACCTGCTGC TCGCGGTGGA TGTCTCCGGC
TCCATGGACT ACCGCGACAT GCGCTGGCAG GACGACGAGA TCAGCCGCCT GGAACTGATC
AAGAAACTCT TCGGCGACTT CATCGAAGAC CGTCGTGGCG ACCGCGTCGG CCTGATCCTG
TTCGGCAGCC AGGCCTACCT GCAGGCGCCG CTGACCTTCG ACCGGCACAC CGTGCGGGTC
TGGCTGGACG AGGCGCAGAT CGGCATCGCC GGCAAGAACA CCGCGATCGG CGACGCCATC
GGCCTGGCGG TCAAGCGCCT GCGCCAGCGG CCCGCGGAAA GCCGGGTGCT GGTGCTGATC
ACCGACGGCG CCAACACCGG CGGACAGATA GCCCCGCAGA TCGCCGCGCA ACTGGCCGCC
GAGCAACAGG TGAAGATCTA CACCATCGGC GTCGGCGCCG ACCCGCAGCA GGGCGGCGTG
CCCGGCCTGT TCGGCTTCAA CCCGGGGCTC GATCTCGACG AGCCGACCCT GCGCGGTATC
GCCGAGATCA CTGGCGGCGA ATACTTCCGC GCGCGATCCA GCGCCGAGCT GGAAAGCATT
TCCGCGACCC TCGACCGCCT CGAACCGGTC GCCCAGCAGA CTACCCGGGC GCGCCCGGCC
CTGGCGCTGT ACAGTTGGCC GCTGGCCGCC GCCCTCGGCC TGAGCGTGCT GCTGGTGGCG
CTGGAACTCT GGCCACGGGA AAACCGGACC TGGCCGCGCC GCCGTTCCGG GAGGCAACCA
TGA
 
Protein sequence
MFEFAWPWVF ALAPLPWLLR LVLPAADSGE AALKVSFLDE LESLAGRRAR ARLPAWRQQV 
RFALLWFLLL LAAARPQWVG EPLPLPASGR DLLLAVDVSG SMDYRDMRWQ DDEISRLELI
KKLFGDFIED RRGDRVGLIL FGSQAYLQAP LTFDRHTVRV WLDEAQIGIA GKNTAIGDAI
GLAVKRLRQR PAESRVLVLI TDGANTGGQI APQIAAQLAA EQQVKIYTIG VGADPQQGGV
PGLFGFNPGL DLDEPTLRGI AEITGGEYFR ARSSAELESI SATLDRLEPV AQQTTRARPA
LALYSWPLAA ALGLSVLLVA LELWPRENRT WPRRRSGRQP