| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_24390 |
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| Symbol | |
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| ID | 4384105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2123468 |
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| End bp | 2125228 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639324521 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_790100 |
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| Protein GI | 116051070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00557521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT TGCTGGACGC CTGGCCGCAC TGGCTGCGCC CCTACTGGCT GCTGCTGGCG
CCGCTGCTTG GCTGGTTGCT GTGGAAGCTG CTGCATCGCC AGCGTCGTGC CGGACGCTGG
CAATTGCTGC TGCCGACGGC CTTCCAGCCC TGGCTGCTGG TCGGCGGCGC CGGGCGGCAG
AACCGCATGC CCTGGATCTG CCTCGGCATC GCCTGGCTGC TGGCCCTGCT GGCCTTGCTC
GGGCCCAGTT GGCAGCAACT GGAACAGCCC TCGATGAAGC GTAGCGACCC GCTGGTGGCG
ATCCTCCAGC TGACTCCCGG GATGCTTGCC GGCGACCTGT CGCCGACCCG CCTGGAGCAG
GCCCGGCGCA AGCTGCTCGA CCTGCTTCGC ACGCGCAACG ACGCGCAGAC CGCGATCGTC
GTCTACGCCG GCAGCGCGCA TACCCTGGTG CCGCTGTCGG ACGACCAGCT CACCGCGCGC
AACCTGCTCG ACGCCCTGAA ACCTTCGATC ATGCCCGAGC CCGGCCAGCG CGCCGACCTC
GCCGTGCGCC AGGCCCTCGA CCTGCTGGAA CAGGGCGCCC AGGGCCGCGG CCGCCTGCTG
CTGCTGACCA GCGGGCTGAG CGAACCCGAG CGCCAGGGCA TCCGCAGCGC CCTCGAGCAC
CGGGCGGCGC GCCTCGCCGT GCTCGGCGTC GGCACGCCGA AGGGCGCTCC GGTGCAGCAG
GAGGATGGCA GCTTCCTCAA GGACGATCAG GGCGGCATCC TCCTGCCCAG GCTCGACGAA
AGCGGGCTGC GCCGCTTCGC CGCGGAGATC GGCGCCGGCT ACCAGCGCCT GCGGCCGAAC
GACCGCGACC TCGACAGCCT CGGCCTGCTG GCCCGCGGCG GCACGCTGGA GGAAGACCGC
GAGAACGCCC TGCTGCGCCT GCAGCGCTGG GCCGACCAGG GTTACTGGCT GCTCCTGCCG
CTGCTCCTGC TGGCCGCCTG TGCCGGACGG CGCGGCTGGC TGTTCTGCCT GCCGCTGTTG
ATGCTGAGCC TGCCGCAACC GGCCATGGCC TTCCAGTTCG AAGACCTCTG GCTGCGTCCG
GACCAGCAAG GCCAGCGCCT GTTGCAACGA GGCCAGGCGG ACGAGGCGGC GAAGCGCTTC
GAGGACTTCC GCTGGAAAGG CCTGTCGCTC TACCAGGCCC GCGACTACGC CGCCGCTGCC
CAGGCCTTCG CCCAGGGCGA CCAGGCCGAC GATCACTACA ACCGTGGCAA CGCCCTGGCC
CGCCAGGGCG AACTGGAAGC CGCCGTCGAC GCCTACGAAC AAGCCCTGGA GCGCCAGCCG
CAACTGGTCG CCGCGCAACG CAACAAGGCC CTGGTCGAGG AACTGCTGCG CCAGCGCCAG
GAACAGGCGG CGCAGCAGCA GGCCGGCGAG AACAAGGAAC AGCGCCAGGA AGCGAGCCAG
CAGAGCCCGC CATCCGGAAG CAGCCAGCGG CCGCCGCGCG ATGCGGCGAC CGTCGATGCG
CAGAAGGCCC AGGCCGCGGC GCCCTCGACC AGCCTGCCGG AAGACGAAGG CGAGAAGACC
GCCGGAGCAC CCGGCCAAGC GCAGCCGCAG CCCGACGCCG AGGACGAGCG GACGGGCGAC
GAGGAAGCCG ACGACGGACT CGACGACGAA CGTCGCCAGG CCCTCGAGCA ATGGCTGCGA
CAGATTCCCG ACGATCCCGC CGAGTTGCTG CGGCGCAAGT TCTGGTACCA ACAGCAGCAA
CGCCAGGAAG CCACGCCATG A
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| Protein sequence | MNLLLDAWPH WLRPYWLLLA PLLGWLLWKL LHRQRRAGRW QLLLPTAFQP WLLVGGAGRQ
NRMPWICLGI AWLLALLALL GPSWQQLEQP SMKRSDPLVA ILQLTPGMLA GDLSPTRLEQ
ARRKLLDLLR TRNDAQTAIV VYAGSAHTLV PLSDDQLTAR NLLDALKPSI MPEPGQRADL
AVRQALDLLE QGAQGRGRLL LLTSGLSEPE RQGIRSALEH RAARLAVLGV GTPKGAPVQQ
EDGSFLKDDQ GGILLPRLDE SGLRRFAAEI GAGYQRLRPN DRDLDSLGLL ARGGTLEEDR
ENALLRLQRW ADQGYWLLLP LLLLAACAGR RGWLFCLPLL MLSLPQPAMA FQFEDLWLRP
DQQGQRLLQR GQADEAAKRF EDFRWKGLSL YQARDYAAAA QAFAQGDQAD DHYNRGNALA
RQGELEAAVD AYEQALERQP QLVAAQRNKA LVEELLRQRQ EQAAQQQAGE NKEQRQEASQ
QSPPSGSSQR PPRDAATVDA QKAQAAAPST SLPEDEGEKT AGAPGQAQPQ PDAEDERTGD
EEADDGLDDE RRQALEQWLR QIPDDPAELL RRKFWYQQQQ RQEATP
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