| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_24380 |
|---|
| Symbol | |
|---|
| ID | 4384106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2121840 |
|---|
| End bp | 2123471 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639324520 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790099 |
|---|
| Protein GI | 116051071 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00155106 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC TGTTCTGCAG CCTGCTTCTC GCGCTCCTCT GCGTCTCCGC CCACGCCAGC
TTCAGCGCCA GCGTCGACCG CGCCCGCCTG ACCGAAGGGG AAAGCGTCGA ACTGACGCTG
GAATCGGACG ACCCGACCCT CTTCGGCAAG CCCGACCTGA GCCCGCTGGA CGCCCTCTTC
GAGGTCCTCG GCACGCGCCA GGTCAACCGT CTCGCCACGC AGAACGGCCG GGCCCAGGCC
ACCACCCGCT GGATCGTCAC CCTCCTGCCG AAGCAGAGCG GCTACGTGGC GATCCCGCCG
ATCAGCCTCG GCGCCAGCAG CACCCAGCCG ATCAGGCTGC ACGTACTGGA GGCGCGCGAC
CGCGCCAAGA GCAGCAAGCT GGCGCCGGTC TTCATCGATG CCAGCGTCGA CCAGGAGACG
GTCTACGTGC AGGCCCAGGC GATCCTCACC CTGCGCATCT ACCACTCGGT GTCGCTATAC
GACGACAGCA GCCTGACCCC GCTGGCGATG AACGACGCGA AGGTCGAACA GCTCGGCGAG
GCGCGTACCT ACGAGAAGGA GATCAACGGC ATCCGCCACG GCGTGATCGA GGTGCGCTAC
GCGATCTTCC CGCAGAAGAG CGGCACCCTG GAGATTCCTG CGCAAGCCTT CAGCGCGACC
CTGGTCGACC GTGGCAGCGA CGACTACAAC CCCTTCGGCC CGCGCCCCGG CCGGCAGATG
CGGGTGACTT CGCCGAGCAT CCCGCTGCAG GTCCGGCCCA AGCCTGCCGA CTATCCGGCC
GACGCGCCCT GGATGCCGGC CCGCGCGCTG AGCATCAGCG AAAGCTGGAG CCCGCAGCCG
GAGCAGGCGC AGGTCGGCGA ATCGCTGACG CGCAATGTGC TGCTGAAGGT CGAGGGGCTT
TCCGGCACCC AGCTTCCGCC GTTGCCGCTG CCCGACGTGC AAGGCCTGCG GCGCTACCCG
GACCAACCGC AGTTGGCCGA CCAGAGCACC GACCAGGGCC TCATCGGCAG TCGCGAGGAA
CGCGAGGCGC TGGTGCCCGA GCAGGCCGGG CGCATCGAGT TGCCGGCGCT CGAAGTGGTC
TGGTGGAACA CCCGCGAAGA CCGCCTGGAG CGCACCAGCC TGCCACCGCG CACCCTGGAA
GTGGCCGCCG CGCCGCAGGC CGAGGCGGAG CCGCCGGCGG CGGCGCTGCC GCTCGGCGAA
CGCCTGGAGC CGACGCTCTG GCCCTGGCAA CTGGCTACCG CCGTGCTGGC CCTGACCACC
CTGCTCGGCT TCGGCCTCTG GTGGCGCGCC CGCCAGCTGC CGGCGGTGAT CCGCGCCGCA
GCCAACGGCC CGAGCAGCCG CAGCCTGCTC GACGAGCTGC GCCGCGCCTG CCTGGCCAAC
GATCCCCAGG CGACCCGCCA GGCCCTGGAC GCCTGGGCTC GTCAGCAACC CGATACCCTG
GCCGACATGG CGGCCCGCTT CGTACCGCTG TCCGACGCCC TGGATGGCCT CAACGGCGCG
CTGTACAGCG AGAGCGGCCA TTCCTGGCAG GGCGAGGACC TGTGGCGGGC GATCCGCGCC
CTGCCCACCA CGGAACAAGC GCCGGCGGGA GCGGTCGACA ATGGCGGCCT GCCACCGCTC
TATCCGCGCT GA
|
|---|
| Protein sequence | MIRLFCSLLL ALLCVSAHAS FSASVDRARL TEGESVELTL ESDDPTLFGK PDLSPLDALF
EVLGTRQVNR LATQNGRAQA TTRWIVTLLP KQSGYVAIPP ISLGASSTQP IRLHVLEARD
RAKSSKLAPV FIDASVDQET VYVQAQAILT LRIYHSVSLY DDSSLTPLAM NDAKVEQLGE
ARTYEKEING IRHGVIEVRY AIFPQKSGTL EIPAQAFSAT LVDRGSDDYN PFGPRPGRQM
RVTSPSIPLQ VRPKPADYPA DAPWMPARAL SISESWSPQP EQAQVGESLT RNVLLKVEGL
SGTQLPPLPL PDVQGLRRYP DQPQLADQST DQGLIGSREE REALVPEQAG RIELPALEVV
WWNTREDRLE RTSLPPRTLE VAAAPQAEAE PPAAALPLGE RLEPTLWPWQ LATAVLALTT
LLGFGLWWRA RQLPAVIRAA ANGPSSRSLL DELRRACLAN DPQATRQALD AWARQQPDTL
ADMAARFVPL SDALDGLNGA LYSESGHSWQ GEDLWRAIRA LPTTEQAPAG AVDNGGLPPL
YPR
|
|---|
| |