Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_24350 |
Symbol | |
ID | 4384109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2116781 |
End bp | 2117452 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324517 |
Product | putative two-component response regulator |
Protein accession | YP_790096 |
Protein GI | 116051074 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00112391 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCC ACGTACTCGT CGTCGAAGAC AACTTCGATC TCGCCGGCAC CGTCATCGAC TACCTCGAGG CCGCCGGGGT GGTCTGCGAT CACGCCCGCG ACGGCCAGGC CGGCCTCAAC CTGGCGCGCG CCAACCGCTA CGACGTGATC CTGCTGGACA TCATGCTGCC GCGCATCAAC GGCCGGCAGG TCTGTCGCCA GCTGCGCGAA GCCGGCCTGC AGACCCCGGT ACTCATGCTC ACCGCCCTGG ATACCCTGCA GGACAAGCTC GACGGCTTCG ACGCCGGCGC CGACGACTAT CTGCTCAAGC CCTTCGAACT GCCGGAGCTG CTGGTCCGCC TGCAAGCCCT CAGCCGGCGC CGCAGCGGCC AGGCCCAGCG CCTGCAGGTC GACGACCTGG TGATGGACCT CGACAGCCGC CAGGCCAGCC GCGGCGGCAC GCCCCTGGCG CTGTCCCCCA CCGCCTGGAA GATCCTCGAG TGCCTGATGC GCGCCAGCCC CGCGCTGGTC ACCCGCGAGC AGCTGGGGCG CAGCGTCTGG GGCGACGAGC CGCCGGAAAG CAACACCCTC AACGTGCACA TGCACCACCT GCGCAGCACC GTCGACAAGG GGTTCGCCAC CCCTCTGATC CATACCCTGC ACAGCGTCGG CTTCCAGCTG GAGCGAAAAT GA
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Protein sequence | MHIHVLVVED NFDLAGTVID YLEAAGVVCD HARDGQAGLN LARANRYDVI LLDIMLPRIN GRQVCRQLRE AGLQTPVLML TALDTLQDKL DGFDAGADDY LLKPFELPEL LVRLQALSRR RSGQAQRLQV DDLVMDLDSR QASRGGTPLA LSPTAWKILE CLMRASPALV TREQLGRSVW GDEPPESNTL NVHMHHLRST VDKGFATPLI HTLHSVGFQL ERK
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