| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_24270 |
|---|
| Symbol | pepN |
|---|
| ID | 4384115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2105253 |
|---|
| End bp | 2107910 |
|---|
| Gene Length | 2658 bp |
|---|
| Protein Length | 885 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639324511 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_790090 |
|---|
| Protein GI | 116051080 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.626767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCG AGCAACCGAA AGTCATCCAC CTCAAGGACT ATCAGGCGCC GGACTACCTG
ATCGACGAGA CCCACCTGAA GTTCGAACTG TTCGAAGACC ACAGCCTGGT GCACGCCGAG
CTGAAGCTGC GGCGCAACCC CGAGCGCGGC GCCGGCCTGC CGCCGCTGTT GCTGCATGGT
CAGCAACTGG AGCTGCTGGC GCTCGAACTG GACGGCCAGG CGCTCGGCGC GGACGACTAC
CAACTGGACG ACGAGCAGCT CGGGGTGCAA CCGCGGCAGG CCGAGTTCGT CCTCAGGAGC
ACGGTGCGTA TCCATCCGGA GAGCAACACC GCGCTGGAAG GCCTGTACAA GTCCGGCAAG
ATGTTCTGCA CCCAGTGCGA GGCCGAGGGT TTCCGCAAGA TCACCTATTA CCTCGACCGT
CCCGACGTGA TGAGTCGCTT TACCACCACC GTCAGCGCCG AACAGCAGCG CTACCCGGTG
CTGCTCTCCA ACGGCAACCC GCTGGCCAGC GGTTCCGAAG GCAACGGCCG GCACTGGGCG
ACCTGGGAAG ACCCGTTCAA GAAGCCGGCC TACCTGTTCG CCCTGGTCGC CGGCGACCTC
TGGTGCGTCG AGGACAGCTT CCGCACCATG AGCCAGCGCG ACGTGGCGCT GCGCATCTAC
GTCGAGCCGG AGAACATCGA CAAGGTCCAG CACGCCATGG ACAGCCTGAA GAAGTCGATG
CGCTGGGACG AGGAGGTCTA CGGCCGCGAA TACGACCTGG ACATCTTCAT GATCGTCGCG
GTCAACGACT TCAACATGGG CGCGATGGAG AACAAGGGCC TCAACATCTT CAACTCCAGT
TGCGTCCTGG CCCGTGCCGA AACCGCCACC GACGCCGCCC ACCAGCGGGT CGAGGGCGTG
GTGGCGCATG AGTATTTCCA CAACTGGTCG GGCAACCGGG TCACCTGCCG CGACTGGTTC
CAGCTGTCGC TCAAGGAAGG CTTCACCGTA TTCCGCGACT CGGAATTCTC CGCCGACATG
AACTCGCGCA CGGTCAAGCG CGTCGAGGAC GTCGCCTTCC TGCGCACCAA CCAGTTCGCC
GAGGACGCCG GGCCGATGGC GCATCCGGTG CGCCCCGACT CGTTCATCGA GATTTCCAAC
TTCTACACCC TGACCGTCTA CGAGAAGGGC TCGGAAGTGG TGCGGATGAT CCACACCCTG
CTCGGCGCCG AAGGCTTCCG CAAGGGCTCG GACCTGTACT TCCAGCGCCA CGACGGCCAG
GCGGTGACCT GCGACGATTT CGTCAAGGCC ATGGAAGACG CCAATGGCGT CGACCTGACC
CAGTTCAAGC GCTGGTACAG CCAGTCCGGC ACTCCGCGCC TGGCGGTGGA AGGCGAGTAC
GACGCCGCCG CCCGCCGCTA CACCCTGACG GTGCGCCAGA GCTGCCCGCC GACTCCCGGC
CAGCCGAGCA AGGAACCCTT CGTCATCCCG CTGGAGCTGG GCCTGCTCGA CGGCCAGGGC
CACGAACTCC CGCTGCGCCT GGAAGGCGAG GCCGCGGCCC AGGGCGGCAA CCGCGTGCTG
GCGGTGACCG AGGCCGAGCA GCGCTTCGTC TTCGTCGAGG TGCCGGAGCA GCCGCTGCCA
TCGCTGCTGC GCGGCTTCTC CGCGCCGGTG AAACTGAGCT TCCCCTACAG CCGCGACCAG
TTGCTGTTCC TCATGCAGCA CGACAGCGAC GGCTTCAACC GCTGGGAGGC CGGCCAACAG
CTTTCGGTGC AGGTCCTGCA GGAGCTGATC GGCCAGCACC AGCGCGGCGC GCAACTGGTA
CTCGACCCGC GCCTGATCGA GGCCTACCGC ACCCTCCTGG CGGACGAGGC GCTGGACCAG
GCGATGGTCG CCGAGATGCT CTCGCTGCCC AGCGAGGCCT ATCTCACCGA GATCAGCGAA
GTCGCCGATG TCGACGCGAT CCATGCCGCC CGCGAATTCG CCCGCCAGCG TATCGGCGAA
GCGCTGTTCG AGCCGCTGTG GCAGCGTTAC CAGGCCAACC GCAAGATTTC CCGCGACACC
GCCTACCTCG CCGAAGCCTC GCACATCGCC CGGCGCAGCC TGCAGAATAT CGCGCTGTCC
TACCTGTCGC TGTCGGGCCG GGAGGAAATC CTCGCCGCCT GCCTGGAGCA GTACGAAGGC
TGCGACAACA TGACCGAGCG CCTGACCGCC CTGGCGGTGC TGGTCAATTC CGGCTTCGAG
GCAGAGAAGG GCAAGGCCCT GGCCATGTTC GCCGACTACT TCAAGGACGA CCCGCTGGTG
ATGGACCAGT GGTTCAGCGT GCAGGCCGGC TCGCCGCTGC CGGGCGGGCT GGAGCGGGTC
CAGGCGCTGA TGCAGCACCC GGCCTTCACC CTGAAGAACC CGAACAAGGT GCGCGCGCTG
ATCGGCGCGT TCGCCAACCA GAACCTGGTC AACTTCCATC GTCCTGACGG CGCCGGCTAT
CGCTTCCTCG CCGACCAGGT GATCGTGCTC AACGCACTCA ACCCGCAGAT CGCCTCGCGC
CTGCTGATGC CGCTGACCCG CTGGCGCAAG TACGACGAGG CGCGGCAGGC GCTGATGCGC
GGCGAGCTGG AACGTATCCT GGCCTCCGGC GAGCTGTCCA GCGACGTCTA CGAAGTGGTG
AGCAAGAGCC TGGCCTGA
|
|---|
| Protein sequence | MRTEQPKVIH LKDYQAPDYL IDETHLKFEL FEDHSLVHAE LKLRRNPERG AGLPPLLLHG
QQLELLALEL DGQALGADDY QLDDEQLGVQ PRQAEFVLRS TVRIHPESNT ALEGLYKSGK
MFCTQCEAEG FRKITYYLDR PDVMSRFTTT VSAEQQRYPV LLSNGNPLAS GSEGNGRHWA
TWEDPFKKPA YLFALVAGDL WCVEDSFRTM SQRDVALRIY VEPENIDKVQ HAMDSLKKSM
RWDEEVYGRE YDLDIFMIVA VNDFNMGAME NKGLNIFNSS CVLARAETAT DAAHQRVEGV
VAHEYFHNWS GNRVTCRDWF QLSLKEGFTV FRDSEFSADM NSRTVKRVED VAFLRTNQFA
EDAGPMAHPV RPDSFIEISN FYTLTVYEKG SEVVRMIHTL LGAEGFRKGS DLYFQRHDGQ
AVTCDDFVKA MEDANGVDLT QFKRWYSQSG TPRLAVEGEY DAAARRYTLT VRQSCPPTPG
QPSKEPFVIP LELGLLDGQG HELPLRLEGE AAAQGGNRVL AVTEAEQRFV FVEVPEQPLP
SLLRGFSAPV KLSFPYSRDQ LLFLMQHDSD GFNRWEAGQQ LSVQVLQELI GQHQRGAQLV
LDPRLIEAYR TLLADEALDQ AMVAEMLSLP SEAYLTEISE VADVDAIHAA REFARQRIGE
ALFEPLWQRY QANRKISRDT AYLAEASHIA RRSLQNIALS YLSLSGREEI LAACLEQYEG
CDNMTERLTA LAVLVNSGFE AEKGKALAMF ADYFKDDPLV MDQWFSVQAG SPLPGGLERV
QALMQHPAFT LKNPNKVRAL IGAFANQNLV NFHRPDGAGY RFLADQVIVL NALNPQIASR
LLMPLTRWRK YDEARQALMR GELERILASG ELSSDVYEVV SKSLA
|
|---|
| |