| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_24060 |
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| Symbol | xcpW |
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| ID | 4381098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2088952 |
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| End bp | 2089665 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639324493 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_790075 |
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| Protein GI | 116051094 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGCTAC AGCGGGGCTT CACCCTGCTC GAGCTGCTGA TCGCCATCGC CATCTTCGCC
CTGCTGGCCC TGGCCACCTA CCGCATGTTC GACAGCGTGA TGCAGACCGA CCAGGCGACT
CGCGTGCAGG AGCAGCGCAT GCGCGAGCTG GTGCGGGCGA TGGGCGCCCT GGAGCGCGAC
CTGACCCAGG CGGTCGAACG TCCGGTACGC GACGAACTGG GCGATAACCG TGGCGCCTTC
CTCAGCGAGG GCGAGAACGA CCAGATCGTC GAATTCACCC GTGGCGGCTG GCGCAACCCG
CTCGGCCAGG CGCGCTCGCG CCTGCAGCGG GTGCGCTGGT CGCTGTCCGG GGAGACCCTC
GAACGCCGCT ACTGGCTGGT TCTGGACCGC GCCCAGGACA GCAAGCCACG GGTGCAGCAG
GTGCTGGACG GGGTTACCGC GCTGAGCTGG CGCTTCCTCG ACAAGGAGCA CAACTGGCAG
GGCCACTGGC CGACCGACGA AGGCAGCGAG GAGGAGCGCC TGGAAAGCCT GCCGCTGGCG
GTGGAGATGA CCCTGGAGCA CCGCCACTAC GGCAAGCTGG TGCGCGTCTG GCGTCTGCTC
GATCCGCCGC TCAAGCAGGA CCAGCCGCAG GGCCAGCCGG GCGGCGAGAA TGGCGAGAAC
GGCGAGGGCG GGGTGCCGCA GCCGCCGGAA GGCATGCCGG GGGCGCCGGA ATGA
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| Protein sequence | MRLQRGFTLL ELLIAIAIFA LLALATYRMF DSVMQTDQAT RVQEQRMREL VRAMGALERD
LTQAVERPVR DELGDNRGAF LSEGENDQIV EFTRGGWRNP LGQARSRLQR VRWSLSGETL
ERRYWLVLDR AQDSKPRVQQ VLDGVTALSW RFLDKEHNWQ GHWPTDEGSE EERLESLPLA
VEMTLEHRHY GKLVRVWRLL DPPLKQDQPQ GQPGGENGEN GEGGVPQPPE GMPGAPE
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