| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23990 |
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| Symbol | xcpR |
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| ID | 4381103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2084868 |
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| End bp | 2086376 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639324488 |
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| Product | general secretion pathway protein E |
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| Protein accession | YP_790070 |
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| Protein GI | 116051099 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAG CCCCATTACC CGACATCGCC GCGCCGGCCG CACCGCCACG GCGTCTGCCG
TTCAGCTTCG CCAAGCGCCA GGGCCTGTTG TTCCTGTGCC TGGAGGAGCA GTACTGGCTG
GCCTGCCGGC CGCAGGTGGA GCTGGCGGCG ATCGCCGAGG CGCAGCGCTT CGCCGGCCGC
CGCCTGCCGC TCAAGGCGCT CGGCGAGGAC GCCTTCAACC AGGCCCTGGC GGCCTCCTAC
CAGCACGACT CCTCGGCGGC CATGCAGCTC GCCGAGGACC TCGGCGGCAG CCTGGACCTC
GCCGCGCTGG CCGACCAGGT CCCGGAAACC GAGGACCTGA TGGAGCAGGA GGACGACGCG
CCGATCATTC GCCTGATCAA CGCGATCCTC GGCGAGGCGA TCCGCGAGAA CGCCTCGGAC
ATCCACCTGG AAACCTTCGA GAAACGCCTG GTGGTGCGCT TCCGCGTCGA CGGCGTGCTG
CGCGAGGTGC TGGAGCCCAA GCGCGAGCTG GCGGCCCTGC TGGTATCGCG GATCAAGGTC
ATGGCGCGGC TGGACATCGC CGAGAAGCGT ATTCCCCAGG ATGGGCGGAT TTCCCTGCGG
GTCGGCGGGC GCGAGGTGGA CATCCGCGTC TCGACCCTGC CCTCGGCCAA CGGCGAACGG
GTGGTGCTGC GTCTGCTCGA CAAGCAGGCC GGGCGCCTGA ACCTGCAACA CCTGGGCATG
AGCGAGCGCG ACCGCAAGCT GATGGACGAA ACGGTGCGCA AGCCGCACGG CATCCTGCTG
GTCACCGGCC CCACCGGCTC GGGCAAGACC ACCACCCTGT ACGCCAGCCT GACCACGCTC
AACGACCGCA CGCGGAACAT CCTCACCGTC GAGGATCCGA TCGAATACCA CCTGGAGGGC
ATCGGCCAGA CCCAGGTCAA CGCCAAGGTC GACATGACCT TCGCCCGCGG CCTGCGGGCG
ATCCTCCGGC AGGACCCGGA CGTGGTGATG GTCGGCGAGA TCCGCGACCG GGAGACCGCC
GAGATCGCGG TGCAGGCTTC GCTGACCGGC CACCTGGTGC TCTCGACCCT GCACACCAAC
AGCGCCATCG GCGCGATCAC CCGCCTGGTG GACATGGGCA TCGAGCCGTT CCTGCTGTCC
TCCTCCATGC TTGGCGTGCT GGCCCAGCGC CTGGTGCGGG TGCTCTGCCC GGCGTGCAAG
GAGCCCTACC GCGCCGACGA GGCCGAGTGC GCGCTGCTCG GCGTCGATCC CGCCGCGCCG
CCGACCCTGC ATCGCGCCCG CGGCTGCGGC GAGTGCCACC AGCATGGCTA TCGCGGGCGT
ACCGGTATCT ATGAACTGGT GGTGTTCGAC GACCACATGC GCTCGCTGAT CCACAACGAA
TCCTCCGAGC AGGAAATGAC CCGGCATGCC CGCACCAGCG GACCAAGCAT CCGCGACGAC
GGTCGGCGCA AGGTGCTGGA AGGCGTCACT ACGGTCGAGG AAGTCCTGCG CGTGACCCGG
GAAGAATAA
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| Protein sequence | MMTAPLPDIA APAAPPRRLP FSFAKRQGLL FLCLEEQYWL ACRPQVELAA IAEAQRFAGR
RLPLKALGED AFNQALAASY QHDSSAAMQL AEDLGGSLDL AALADQVPET EDLMEQEDDA
PIIRLINAIL GEAIRENASD IHLETFEKRL VVRFRVDGVL REVLEPKREL AALLVSRIKV
MARLDIAEKR IPQDGRISLR VGGREVDIRV STLPSANGER VVLRLLDKQA GRLNLQHLGM
SERDRKLMDE TVRKPHGILL VTGPTGSGKT TTLYASLTTL NDRTRNILTV EDPIEYHLEG
IGQTQVNAKV DMTFARGLRA ILRQDPDVVM VGEIRDRETA EIAVQASLTG HLVLSTLHTN
SAIGAITRLV DMGIEPFLLS SSMLGVLAQR LVRVLCPACK EPYRADEAEC ALLGVDPAAP
PTLHRARGCG ECHQHGYRGR TGIYELVVFD DHMRSLIHNE SSEQEMTRHA RTSGPSIRDD
GRRKVLEGVT TVEEVLRVTR EE
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