Gene PA14_23700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23700 
Symbol 
ID4381124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2061055 
End bp2061966 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID639324467 
ProductLysR family transcriptional regulator 
Protein accessionYP_790049 
Protein GI116051120 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0115342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGC TTGAAGTCAA CCGTTCCGGC GAACTGGAGG TGTTTGCCCG GGTCGTCGAG 
TCGGGGGGCT TTTCCGCCGC CGCTCGACGT TGCGGCATGA CGCCCTCGGC AGTCAGCAAG
CTGATCACCC GGCTCGAACA GCGCCTGGGA ACCCGCTTGC TGAACCGCTC CACCCGTCAA
TTGCAACTGA CGCCCGAGGG ATGCACGTTC TACGAGCGCG GGGTGCGTAT CCTGGCCGAC
CTGGAGGAAG CCGAGCGGTG TGCGAGCGAA AACGCGGCGC CGCGCGGGCG CTTGCGAGTC
AACGCCAACG TGCCTTTCGG ACATCATTTC CTGCTGCCGC TGGTGCCCGA GTTCCTCGCG
CAGCATCCCG AGGTGACGCT GGATATCGTG CTGACCGATG AGGTCGTCGA CATCCTCGAG
CAGCGCACCG ACGTGGCCGT GCGCGCGGGG CCGCTGAAAA GCTCGAGCCT GGTGGCGCGC
AAGCTGGGGA GCACGCGCAT GCTGATCGTC GGTGCGCCGG CCTACCTGGC CCGGCATGGC
ATGCCGGCCA CGCCGCAGGC GCTGCTGGGG CACAACCGCC TCGGCGCCAA CTATGTGCGA
ACGCGCTCCG GCTGGCCGCT GCGGGACGCC GGCGAGGAAC TCGTGGTGCC GTTGTCGGGC
AACGCCCAGG CCAGCGATGG CGAGGCGCTG CGCCGTCTGG CCGTGGCCGG CCTGGGCCTG
GCGCGGCTGG CCGCGTTCCA GGTGCGCGAG GACATAGCCG CCGGTCGCCT GATTCCCGTG
CTCGAGGCAT ACAACCCGGG CGACCTGGAG GAAGTCCACG CCGTCTACGT CGGCCAGGGC
GGCTATCTGC CGCTGCGCGT GCGGGCGTTC CTGAACTTTC TGGCGGAGCG CGTCGATATG
AGCCAGGGTT GA
 
Protein sequence
MARLEVNRSG ELEVFARVVE SGGFSAAARR CGMTPSAVSK LITRLEQRLG TRLLNRSTRQ 
LQLTPEGCTF YERGVRILAD LEEAERCASE NAAPRGRLRV NANVPFGHHF LLPLVPEFLA
QHPEVTLDIV LTDEVVDILE QRTDVAVRAG PLKSSSLVAR KLGSTRMLIV GAPAYLARHG
MPATPQALLG HNRLGANYVR TRSGWPLRDA GEELVVPLSG NAQASDGEAL RRLAVAGLGL
ARLAAFQVRE DIAAGRLIPV LEAYNPGDLE EVHAVYVGQG GYLPLRVRAF LNFLAERVDM
SQG