Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23590 |
Symbol | |
ID | 4381133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2053723 |
End bp | 2054265 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324458 |
Product | putative transcriptional regulator |
Protein accession | YP_790040 |
Protein GI | 116051129 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0142024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AGAAAACCCA GACCCGTGCC CGCATCCTCG GTGCCGCCAC CCAGGCCCTG CTCGAGCGGG GCGCCGTCGA GCCTAGCGTC GGGGAAGTGA TGGGCGCGGC GGGGCTCACC GTCGGCGGCT TCTATGCCCA CTTCCAGAGC AAGGATGCGC TGATGCTCGA GGCGTTCGAG CAATTGCTCG GCAAGCGCCG CGAACTGCTC GGCGAACTCG ACCCCGGATT GTCGGGAAAG GAGCGTCGGG CCTTGGCGGC CGCTTTCTAC CTGTCGCGCA AGCATCGGGA CGCACAGGTC GACGCCGGTT GTCCGCTGCC GGCGACCCTC GCCGAGGTGG CGCGCCTGCC GGAGGGGTTT CGCGAGGTCT TGAGCAGGCA TGTCGAGATC ATGGTCGCCA GCCTGGCGGA AAGTCCCGAG GAAACCGACG TCGCCCTGGC CGACCTGGTG TTGATGATTG GCGGTTTGGC GCTGGCCCGG GCATTGGGGC CGGGCGAGCT GTCCGACCGG GTTCTGCGTG CCGCCAAGCA GGCGGTGAAC TGA
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Protein sequence | MSDKKTQTRA RILGAATQAL LERGAVEPSV GEVMGAAGLT VGGFYAHFQS KDALMLEAFE QLLGKRRELL GELDPGLSGK ERRALAAAFY LSRKHRDAQV DAGCPLPATL AEVARLPEGF REVLSRHVEI MVASLAESPE ETDVALADLV LMIGGLALAR ALGPGELSDR VLRAAKQAVN
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