Gene PA14_23540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23540 
Symbolact 
ID4381135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2050430 
End bp2051350 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID639324454 
Productputative transcriptional regulator 
Protein accessionYP_790038 
Protein GI116051131 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00483794 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGGCTTG ATGATGCGCT GATCTTCACC CGCGTGGTGG AGTACCACAG CTTCACCCAG 
GCCGCGCAGA GCCTGGGCAT GCAGAAGTCC ACGGTGAGCC GGCGCATCGC CCTGCTGGAG
GAGCGCCTGG GCGTGCGCCT GCTCAATCGC ACCACCCGTA AGTTGCGCCT GACCGAAGTA
GGGCAGGCCT ACTACGAGCG CTGCCGGCAG ATCATGCACG ATTTCGCCGA GGCCGAGCAG
GCGGTCATGC AGTTGCAACA GGCGCCGTCG GGATTGCTGC GGATCACCTC GCCGATAGAG
TTCGGCCAGA TGTTCCTCGC CAGCCTGCTG GGCGACTTCA TGCGCCAGTA CCCGCAGATC
ACCGCCGAGG TCGAGCTGGC CTCGCGCAGC GTCGATCCGC TGCAGGAGGG CGTCGACATC
GTGATCATGG TCGGCCAGCC GGAGGATTCC ACCCTGGTGG CCCGTCGCCT GCTCTCTACC
AGCCGCTGGC TCTGCGCCAG CCCCGACTAC CTGGCGGCGC ACGGCACGCC GACATCGGTG
GCCGAGCTTG CCGGGCATCG CGCGGTCCTT CTGTCCACCG ACTCCCAGCG CTACTGGCCG
CTTTCCGGAG ACAGCCTGCC CTGCCAGCGG GTGCTGTCCT GCAACAACAT CACCTTCGCC
CGCGAGGCGG TGGTCGCCGG TGCCGGCATT GCCGCGCTAC CGGCGCTGAT CTGTGCGGAG
AGCGTGCACA GCGGGCGTCT GGTGCGTTTG CTGGCGGACG TGCCGTTGCC GGTCGGCGAA
CTGTATGCGG TCTATCCTTC GCGGCGTTTC CAGGCGATGA AGGTCAAGGC CTTCCTCGAT
TTCCTGATCA GCCGCCTGCC GGCCGACACC GGTCGTTTAC TGGAGCCGGA GGCGGCCCGC
CTGATAACAT CGCGCCCCTG A
 
Protein sequence
MGLDDALIFT RVVEYHSFTQ AAQSLGMQKS TVSRRIALLE ERLGVRLLNR TTRKLRLTEV 
GQAYYERCRQ IMHDFAEAEQ AVMQLQQAPS GLLRITSPIE FGQMFLASLL GDFMRQYPQI
TAEVELASRS VDPLQEGVDI VIMVGQPEDS TLVARRLLST SRWLCASPDY LAAHGTPTSV
AELAGHRAVL LSTDSQRYWP LSGDSLPCQR VLSCNNITFA REAVVAGAGI AALPALICAE
SVHSGRLVRL LADVPLPVGE LYAVYPSRRF QAMKVKAFLD FLISRLPADT GRLLEPEAAR
LITSRP