| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23450 |
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| Symbol | orfM |
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| ID | 4381143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2039196 |
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| End bp | 2040149 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639324445 |
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| Product | putative NAD dependent epimerase/dehydratase |
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| Protein accession | YP_790030 |
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| Protein GI | 116051139 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000292756 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00536132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGAGTCT TTCTTACTGG TATAACGGGC TTTGTTGGGC TTGCTACTTC AAAGCGTCTA
CTGCAAGAGG GGCATTGTGT GCGAGCGGCA GTGCGTGATG CCAATCCAGC GCTTGCGCAA
GAAGTTGAGC AGGTTGTTTT TGGGAATTTG GTAAAGCACG ACTGGGCTTC TTCGCTTGAG
GGGCAAGAGG TAGTGATACA CTGTGCTGCT CGTGTTCATG TGATGAAGGA TGCATCCCGC
GACCCTTTGA GTGAGTTTCG ACGGGTCAAT GTTGAGGGTA CCCTAAATCT AGCGCGCCAG
GCGGCGAAAG CTGGCGTCAA GAGGTTTGTT TTCATTAGCT CAATAAAGGT CAATGGTGAA
AGTACTAGAC TGGGTGTTCC TTATACCGCT GATGATATTG CCATGCCGCT TGATCCATAT
GGCGTTTCCA AACTTGAGGC TGAACAGAAG CTGCTCTCTC TAGCCGCTCG GGTTGACATG
GAAGTGAGCA TAATACGGCC GGTTTTGGTA TATGGGCCAG GTGTAAAGGC GAATTTTTTG
AGCATGATGG AATGGCTGAA AAAAGGAATG CCATTGCCTC TTGGCGCTAT TGATAATAAG
CGTAGTCTGG TTGCGTTGGA CAATCTGGTT GATCTTATTC TCACTTGTAT GAAACATCCG
GCTGCCGCAA ATCAGATATT TCTCGTCAGC GACGATGAGG ATCTTTCCAC CACAGAATTA
TTGCGGCGTA CCGGCAAAGC GATGGGGCGT CCAGCCAGGT TGATACCCAT TCCATCTCGG
TTTCTCGGTT TTTCCGCTCG CTTGCTCGGT AAGCCGGCTA TTGTGCAGCG TCTGTGCGAG
TCGCTACAGG TCGATATTGA AAAGACTCGA GACCTGTTAG GCTGGCAGCC TCCTGTCAGC
GTAGATGAAG CCTTGCATAA GACTGTGCAT CACTTCTTGG AGCATCAACA ATAA
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| Protein sequence | MRVFLTGITG FVGLATSKRL LQEGHCVRAA VRDANPALAQ EVEQVVFGNL VKHDWASSLE
GQEVVIHCAA RVHVMKDASR DPLSEFRRVN VEGTLNLARQ AAKAGVKRFV FISSIKVNGE
STRLGVPYTA DDIAMPLDPY GVSKLEAEQK LLSLAARVDM EVSIIRPVLV YGPGVKANFL
SMMEWLKKGM PLPLGAIDNK RSLVALDNLV DLILTCMKHP AAANQIFLVS DDEDLSTTEL
LRRTGKAMGR PARLIPIPSR FLGFSARLLG KPAIVQRLCE SLQVDIEKTR DLLGWQPPVS
VDEALHKTVH HFLEHQQ
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