| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23440 |
|---|
| Symbol | orfL |
|---|
| ID | 4381144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2038087 |
|---|
| End bp | 2039199 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639324444 |
|---|
| Product | putative group 1 glycosyl transferase |
|---|
| Protein accession | YP_790029 |
|---|
| Protein GI | 116051140 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000675067 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00579083 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCCC TGCTTGGGGC GCTTCCAGAA AACTCGCAGT TAGAAGTTAT TACTACTCAA
CCTAACCGTT ATAGTAGTTT TTCACTTGAA GCTCCATTGC TCGAAAAGCA CTCGCGACTA
ATTATTCATC GGATTCCTAT TTTTCAGCAT AATAGTGGGA TGTTAGACCA GTCGCGTGCA
TTTTTCAGCT ACCTCAAGGG CGTTCTTGGT ATCACTCGTA ATAAGGATTA TGATGTGGTA
TATGCAACTT CCTCTCGGTT GATGACGGCT TCTCTTGGTG CCTTGGTGGC GAGGCAATTG
CGATGTCCTC TGTATTTGGA TATTCGAGAT ATCTTCGTCG ATACAATTAA GGATGTGTTG
CCAAGTCGGA TAAGTTTCTT TGTAAAGCCT ATTTTCTCAA TGATGGAGCG TATCACTGTT
CGAACTGCTA CCCGAGTTAA TCTGGTCTCT GCAGGTTTTC TGCCTTACTT CAACTCGCGT
TACCCTGGTG GTGATTTTGT TGTATTTACA AATGGAATTG ATGATGAGTT TGTCAAGGTG
CAGACTTCTT GTGAGCGTGA AGAAAGCTCT AGTCTGTATA CGGTGCTTTA CGCAGGTAAT
ATGGGCGAGG GCCAGGGACT CCATTTGATT ATTCCTCAGA TTGCCCGGCA TTTCGACGGC
CATTTGAGGT TCCTCTGTAT CGGTGATGGA GGAAGAAGAA AGCAGTTACA AGATGCCATT
GAAGAGGCTG GTTGCACCAA TGTTGAGATA ACATCTCCTG TTCCCCGTAG TGAGTTGATC
GCAGCCTATC AGAAAGCAGA TGTTCTATTT TTGCACCTAA ATGATTACGA TGCTTTCCGA
AAAGTTCTTC CCTCGAAGAT TTTTGAGTAT GCCGCCTTGG GAAAACCTAT TTGGGCTGGA
GTGGCCGGTT ATTCAGCGGG GTTTATTCAG GATTTTATTT CGAATGCTGC GGTCTTTAGG
CCTTGTAATG TCGAAGATGC GATAAAGGCA TTTTCTTCTT TGTCCATGGT GACAAAACCT
CGGAAAGAGT TTGTCGAACG CTTCGCACGC GAAAAGATCA TGAAAGCACT AGCGGAGGAT
ATTATCTTTG TGGTTCGCGG TGAGGTGAAA TGA
|
|---|
| Protein sequence | MSALLGALPE NSQLEVITTQ PNRYSSFSLE APLLEKHSRL IIHRIPIFQH NSGMLDQSRA
FFSYLKGVLG ITRNKDYDVV YATSSRLMTA SLGALVARQL RCPLYLDIRD IFVDTIKDVL
PSRISFFVKP IFSMMERITV RTATRVNLVS AGFLPYFNSR YPGGDFVVFT NGIDDEFVKV
QTSCEREESS SLYTVLYAGN MGEGQGLHLI IPQIARHFDG HLRFLCIGDG GRRKQLQDAI
EEAGCTNVEI TSPVPRSELI AAYQKADVLF LHLNDYDAFR KVLPSKIFEY AALGKPIWAG
VAGYSAGFIQ DFISNAAVFR PCNVEDAIKA FSSLSMVTKP RKEFVERFAR EKIMKALAED
IIFVVRGEVK
|
|---|
| |