| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23330 |
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| Symbol | rpsA |
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| ID | 4381155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2024157 |
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| End bp | 2025836 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639324433 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_790018 |
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| Protein GI | 116051151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000169607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00388994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA GCTTCGCAGA ACTCTTTGAA GAAAGTCTGA AATCCCTCGA CATGCAGCCG
GGTGCCATCA TCACCGGCAT CGTGGTCGAC ATCGATGGTG ACTGGGTCAC CGTCCATGCC
GGTCTGAAAT CCGAGGGCGT CATCCCGGTC GAGCAGTTCT ACAACGAACA GGGCGAACTG
ACCATCAAGG TGGGTGACGA AGTCCACGTC GCACTGGACG CGGTAGAAGA CGGCTTTGGC
GAGACCAAGC TGTCCCGCGA GAAAGCCAAG CGCGCCGAGA GCTGGATTGT TCTGGAAGCG
GCTTTCGCTG CCGACGAAGT GGTCAAGGGC GTCATCAACG GCAAGGTCAA GGGCGGTTTC
ACCGTCGACG TCAACGGCAT CCGCGCGTTC CTGCCGGGTT CGCTGGTCGA CGTGCGTCCG
GTTCGCGACA CCACCCACCT GGAAGGCAAA GAGCTCGAGT TCAAGGTCAT CAAGCTCGAC
CAGAAGCGCA ACAACGTTGT CGTTTCCCGC CGCAGCGTCC TGGAAGCCGA GAACAGCGCC
GAGCGTGAAG CTCTGCTGGA ATCGCTGCAG GAAGGCCAGC AGGTCAAGGG CATCGTCAAG
AACCTCACCG ACTACGGCGC ATTCGTGGAC CTGGGCGGCG TAGACGGCCT GCTGCACATC
ACCGACATGG CCTGGAAGCG CATCAAGCAT CCGTCCGAGA TCGTCAACGT TGGCGACGAG
ATCGACGTCA AGGTCCTGAA GTTCGACCGC GAGCGCAACC GTGTATCCCT GGGCCTGAAG
CAACTGGGCG AAGACCCGTG GGTTGCCATC AAGGCGCGTT ACCCGGAAGG CACCCGCGTC
ATGGCCCGCG TCACCAACCT CACCGACTAC GGCTGCTTCG CCGAGCTGGA AGAGGGCGTG
GAAGGCCTGG TACACGTCTC CGAAATGGAC TGGACCAACA AGAACATCCA TCCGTCGAAA
GTCGTCCAGG TTGGCGACGA AGTGGAAGTT CAGGTTCTGG ACATCGACGA AGAGCGTCGT
CGTATCTCCC TGGGTATCAA GCAGTGCAAA TCCAACCCGT GGGAAGACTT CTCCAGCCAG
TTCAACAAGG GTGACCGTAT CTCCGGTACC ATCAAGTCGA TCACCGACTT CGGTATCTTC
ATCGGTCTGG ACGGCGGCAT CGACGGCCTG GTCCACCTGT CCGACATCTC CTGGAACGAA
GTCGGCGAAG AAGCCGTACG TCGCTTCAAG AAGGGCGACG AGCTGGAAAC CGTCATCCTG
TCGGTCGACC CGGAGCGCGA GCGCATCTCC CTGGGCATCA AGCAGCTGGA AGACGATCCG
TTCTCCAACT ACGCGTCCCT GCACGAGAAA GGCAGCATCG TCCGCGGTAC CGTGAAGGAA
GTCGACGCCA AAGGCGCTGT CATCAGCCTG GGCGACGACA TCGAAGGTAT CCTGAAGGCT
TCCGAAATCA GCCGTGACCG CGTCGAAGAC GCGCGCAACG TCCTGAAGGA AGGCGAGGAA
GTCGAAGCCA AGATCATCAG CATCGACCGC AAGAGCCGCG TCATCAGCCT CTCCGTCAAG
TCCAAGGACG TCGATGACGA GAAGGACGCA ATGAAAGAAC TGCGTAAGCA GGAAGTAGAA
AGCGCTGGTC CGACCACCAT CGGTGATCTG ATCCGTGCTC AGATGGAGAA TCAGGGCTAA
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| Protein sequence | MSESFAELFE ESLKSLDMQP GAIITGIVVD IDGDWVTVHA GLKSEGVIPV EQFYNEQGEL
TIKVGDEVHV ALDAVEDGFG ETKLSREKAK RAESWIVLEA AFAADEVVKG VINGKVKGGF
TVDVNGIRAF LPGSLVDVRP VRDTTHLEGK ELEFKVIKLD QKRNNVVVSR RSVLEAENSA
EREALLESLQ EGQQVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRIKH PSEIVNVGDE
IDVKVLKFDR ERNRVSLGLK QLGEDPWVAI KARYPEGTRV MARVTNLTDY GCFAELEEGV
EGLVHVSEMD WTNKNIHPSK VVQVGDEVEV QVLDIDEERR RISLGIKQCK SNPWEDFSSQ
FNKGDRISGT IKSITDFGIF IGLDGGIDGL VHLSDISWNE VGEEAVRRFK KGDELETVIL
SVDPERERIS LGIKQLEDDP FSNYASLHEK GSIVRGTVKE VDAKGAVISL GDDIEGILKA
SEISRDRVED ARNVLKEGEE VEAKIISIDR KSRVISLSVK SKDVDDEKDA MKELRKQEVE
SAGPTTIGDL IRAQMENQG
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