Gene PA14_23260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23260 
SymbolgyrA 
ID4381161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2014754 
End bp2017519 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content66% 
IMG OID639324427 
ProductDNA gyrase subunit A 
Protein accessionYP_790012 
Protein GI116051157 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00503917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCGAAC TGGCCAAAGA AATTCTCCCG GTCAATATCG AAGACGAGCT GAAACAGTCC 
TATCTCGACT ACGCGATGAG CGTGATCGTC GGGCGGGCCC TGCCGGATGC ACGTGACGGC
CTGAAGCCGG TGCACCGCCG TGTGCTTTAT GCCATGAGCG AGCTGGGCAA CGACTGGAAC
AAGCCCTACA AGAAATCCGC CCGTGTGGTC GGCGACGTGA TCGGTAAGTA CCACCCGCAC
GGCGACACCG CGGTCTACGA CACCATCGTG CGCATGGCGC AGCCGTTCTC GCTGCGCTAC
ATGCTGGTAG ACGGCCAGGG CAACTTCGGT TCGGTGGACG GCGACAACGC CGCAGCCATG
CGATACACCG AAGTGCGCAT GGCCAAGCTG GCCCACGAAC TGCTGGCGGA CCTGGAAAAG
GAAACCGTCG ACTGGGTGCC CAACTACGAT GGCACCGAGC AGATCCCGGC GGTCATGCCG
ACCAAGATTC CCAACCTGCT GGTCAACGGT TCCAGTGGTA TCGCCGTGGG CATGGCGACC
AACATCCCGC CGCACAACCT CGGCGAAGTG ATCGACGGCT GCCTGGCGCT GATGGACAAC
CCCGACCTGA CCGTCGATGA GCTGATGCAG TACATCCCCG GTCCGGACTT CCCCACCGCC
GGCATCATCA ACGGCCGCGC CGGGATCATC GAGGCCTACC GCACCGGTCG CGGGCGCATC
TACATCCGCG CCCGTGCCGT CGTCGAGGAG ATGGAGAAGG GCGGCGGTCG CGAGCAGATC
ATCATCACCG AGCTGCCGTA CCAGTTGAAC AAGGCGCGGT TGATCGAGAA GATCGCCGAG
CTGGTGAAAG AGAAGAAGAT CGAGGGTATT TCCGAGCTGC GCGACGAGTC CGACAAGGAC
GGCATGCGCG TGGTCATCGA GCTGCGTCGC GGCGAGGTGG GCGAGGTGGT CCTCAACAAC
CTCTATGCCC AGACCCAGCT GCAGAGCGTG TTCGGCATCA ACGTGGTGGC CCTGGTCGAC
GGCCAGCCGC GCACGCTGAA CCTGAAGGAC ATGCTCGAAG TGTTCGTCCG CCACCGCCGC
GAAGTGGTGA CCCGGCGTAC CGTCTACGAG CTGCGCAAGG CCCGCGAGCG CGGGCACATC
CTGGAAGGCC AGGCGGTCGC CCTGTCGAAC ATCGATCCGG TGATCGAGCT GATCAAGAGT
TCGCCGACCC CGGCCGAGGC CAAGGAACGC CTGATCGCCA CTGCCTGGGA GTCCAGCGCG
GTGGAAGCGA TGGTCGAGCG TGCCGGCGCC GACGCCTGTC GCCCGGAAGA CCTGGATCCG
CAGTACGGCC TGCGCGACGG CAAGTACTAC CTGTCGCCGG AACAGGCCCA GGCGATCCTC
GAGCTGCGCC TGCATCGCCT GACCGGCCTG GAGCACGAGA AGCTGCTCTC CGAATACCAG
GAAATCCTCA ACCTGATCGG CGAGCTGATC CGCATCCTGA CCAACCCGGC GCGCCTGATG
GAGGTGATCC GTGAGGAACT GGAAGCGGTC AAGGCCGAAT TCGGCGATGC TCGCCGCACC
GAGATCGTGG CTTCCCAGGT CGACCTGACC ATCGCCGACC TGATCACCGA GGAAGACCGC
GTGGTGACCA TTTCCCACGG CGGCTACGCC AAGTCCCAGC CGCTGGCCGC CTACCAGGCG
CAGCGTCGCG GCGGCAAAGG CAAGTCCGCC ACCGGGATGA AGGACGAGGA CTACATCGAA
CACCTGCTGG TGGCCAACAG CCATGCGACC CTCCTGCTGT TCTCCAGCAA GGGCAAGGTC
TACTGGCTGC GTACCTTCGA GATTCCGGAG GCCTCGCGTA CCGCGCGTGG CCGGCCGCTG
GTGAACCTGC TGCCGCTGGA CGAGGGCGAG CGGATCACCG CGATGTTGCA GATCGACCTG
GAGGCGCTGC AGCAGAACGG CGGCGCCGAT GACGACCTCG ACGAAGCCGA AGGCGCGGTG
CTCGAGGGCG AGGTGGTCGA GGCCGCCGAG GTCGAGGAAG TCGAGGGCGA GACCGCCGAG
CTGGTGGCCG AGCCGACCGG CGCCTACATC TTCATGGCCA CCGCCTTCGG TACCGTGAAG
AAGACCCCGC TGGTGCAGTT CAGCCGTCCG CGCAGCAGCG GCCTGATCGC GCTCAAGCTG
GAAGAGGGCG ACACCCTGAT CGCCGCCGCG ATCACCGATG GCGCCAAGGA AGTCATGCTG
TTCTCCAGCG CCGGCAAGGT GATCCGCTTC GCCGAGAGCG TGGTGCGCAT CATGGGCCGC
AACGCCCGCG GCGTACGCGG CATGCGCCTG GGCAAGGGGC AGCAACTGAT CTCCATGCTG
ATTCCGGAGT CCGGGGCGCA GATCCTCACC GCCTCCGAGC GCGGCTTCGG CAAGCGTACC
CCGCTGAGCA AGTTCCCGCG TCGCGGCCGT GGCGGCCAGG GGGTGATCGC CATGGTCACC
AACGAGCGCA ACGGCGCGCT GATCGCCGCG GTACAGGTCC AGGAAGGCGA GGAGATCATG
CTGATTTCCG ACCAGGGCAC CCTGGTGCGG ACGCGTGTCG ACGAAGTCTC CCTGTCCGGC
CGCAATACCC AGGGCGTAAC CCTGATCAAG CTCGCCAGCG ACGAGGTACT GGTCGGTCTG
GAGCGTGTCC AGGAGCCGTC GGGCGGAGAT GACGAGGACC TGCCCGAGGG CGAGGAAGCT
GCCGAATCTC TGGGCGAGTC GGCCGAGTCC GAGCCCGCGG CGGAAGCGGA AGGCAACGAA
GAGTAA
 
Protein sequence
MGELAKEILP VNIEDELKQS YLDYAMSVIV GRALPDARDG LKPVHRRVLY AMSELGNDWN 
KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY MLVDGQGNFG SVDGDNAAAM
RYTEVRMAKL AHELLADLEK ETVDWVPNYD GTEQIPAVMP TKIPNLLVNG SSGIAVGMAT
NIPPHNLGEV IDGCLALMDN PDLTVDELMQ YIPGPDFPTA GIINGRAGII EAYRTGRGRI
YIRARAVVEE MEKGGGREQI IITELPYQLN KARLIEKIAE LVKEKKIEGI SELRDESDKD
GMRVVIELRR GEVGEVVLNN LYAQTQLQSV FGINVVALVD GQPRTLNLKD MLEVFVRHRR
EVVTRRTVYE LRKARERGHI LEGQAVALSN IDPVIELIKS SPTPAEAKER LIATAWESSA
VEAMVERAGA DACRPEDLDP QYGLRDGKYY LSPEQAQAIL ELRLHRLTGL EHEKLLSEYQ
EILNLIGELI RILTNPARLM EVIREELEAV KAEFGDARRT EIVASQVDLT IADLITEEDR
VVTISHGGYA KSQPLAAYQA QRRGGKGKSA TGMKDEDYIE HLLVANSHAT LLLFSSKGKV
YWLRTFEIPE ASRTARGRPL VNLLPLDEGE RITAMLQIDL EALQQNGGAD DDLDEAEGAV
LEGEVVEAAE VEEVEGETAE LVAEPTGAYI FMATAFGTVK KTPLVQFSRP RSSGLIALKL
EEGDTLIAAA ITDGAKEVML FSSAGKVIRF AESVVRIMGR NARGVRGMRL GKGQQLISML
IPESGAQILT ASERGFGKRT PLSKFPRRGR GGQGVIAMVT NERNGALIAA VQVQEGEEIM
LISDQGTLVR TRVDEVSLSG RNTQGVTLIK LASDEVLVGL ERVQEPSGGD DEDLPEGEEA
AESLGESAES EPAAEAEGNE E