| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23050 |
|---|
| Symbol | |
|---|
| ID | 4381178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1998255 |
|---|
| End bp | 1999106 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789995 |
|---|
| Protein GI | 116051174 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0103143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGC ATCCGCTGCA GCGTTTCTTT CATTCCATGC GGGCCAAGCG ACCGTTCGAC
TGGGTACGCT TCCAACGTCG CGATCTGCTG TTGATCGACC ATCCGCTGTG CCAGGCCGTA
TTCAGTCGGC AAGGAGCGCA GCTCCTGCAT TTCCAGCCGC AGGGCGAACG CCCGTTGCTG
TGGTGCGCCA GCGAATGGCC GGCCCTCAGC AGTGCGCCGG TGCGCGGCGG CATCCCGGTC
TGCTGGCCGT GGTTCGGCAG CCATCCGAAC GGCAGCGAAT GGCCGCAGCA GGGCTGGGCG
CGGCAACGCG AATGGCGCCT GCTGGATGCC TACGCCGACG AAAGCAAGGT GGTGGTGAGC
TGGCAACTGG ACCTGGAGGA CTGGCACGTG CGCCTCGATG CGCGCCTTGG CCAGCGCCTG
GAGCTGGAGC TGTGCAGCTA CCATGAGGAA GACGACGATT GCCTGTTCAG CTTCGCCCTG
CAGCCCTACT GGCGGGTCGG CGCGCTGAGC CGGGTGGTGG TGCACGGCAT GGAGCTGGAG
TCGGCTCGCG GCCAGCGCGG CGCTTCGCGG ATTCCGGGAA CCTGGATACC GCGCGGCGCG
GTCAAGCAGG TGCTCTACCA TCCCGGATCG CTGGTGCTGG AGGACGGCGG CTGGAACCGC
CGCTTGCGGA TCGACAAGAA CGTCAGCGCC GGCAGCGTGA TCTGGCACCC CGGCAGCCGC
CCGGTGGAGC AGGTCGAGCC GGGCGAAGCG GAACGCTTCC TCTGTATCGG CGCCGCTGGC
TACCGCCCGG GTGGGCTGAT CCTGGCGCCC GGCGAACGCA TGCGCCTGAG TCTCGCCGCC
GGCCTGCAAT AG
|
|---|
| Protein sequence | MLEHPLQRFF HSMRAKRPFD WVRFQRRDLL LIDHPLCQAV FSRQGAQLLH FQPQGERPLL
WCASEWPALS SAPVRGGIPV CWPWFGSHPN GSEWPQQGWA RQREWRLLDA YADESKVVVS
WQLDLEDWHV RLDARLGQRL ELELCSYHEE DDDCLFSFAL QPYWRVGALS RVVVHGMELE
SARGQRGASR IPGTWIPRGA VKQVLYHPGS LVLEDGGWNR RLRIDKNVSA GSVIWHPGSR
PVEQVEPGEA ERFLCIGAAG YRPGGLILAP GERMRLSLAA GLQ
|
|---|
| |