Gene PA14_22960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_22960 
Symbol 
ID4381184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1990360 
End bp1991781 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content68% 
IMG OID639324404 
Productputative two-component sensor 
Protein accessionYP_789989 
Protein GI116051180 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.758955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.36049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGCT CGCTGCTCGG GCGCATGCTG CTCCTGACCC TGCTCGCGGT GCTGGTCGCG 
CAAGGGCTTT CCAGCCTGTT CTGGCTGTCG CACCTGCGCT CCAGCCAGCG CGAGGGCCTG
CTCACCAGCT CGCGCAGCCT GGCCTACTCG ATGGCGGCCA GCGTCAGCTA CTTCCGTTCC
CTGCCGCTCG GCTACCGTCC GCTGGTGCTC GACCAGTTGC GCAGCATGGG CGGTACGCGC
TTCTTCGTCT CGCTGAACGA CCGGCCGCTG GAGATGCGTG CCCTGCCGGA CACGCCGAAC
AAGCAGGCGG TGCTGGAGAT CGTCCAGGAC GTGTTGCATC AACGCCTGGG CAAGGAGGTC
GAGCTGCAGG TCGAATTCGT CAGTCCCGAC GAGCTGCGCC TGTTCAACGG CGCGCTGAAG
CTCGACGAGC TGCCGCGTTC CTGGGCGCAC TACGCGCTGA CCCTGGAGCC GGTGAACCCG
CCGGTGCTGG TGACCCAGAT CCGCATCGGC GACAGCGAGT GGCTGTACAT CGCCAGCCTG
ATGCCGGCGC CGTACGTCAG CCTGGAACCC GAGGGACTGC AACCGCAGCA GGTGCTCTCG
ATCGTTTTCA CCAGCCTGTT GCTGCTGCTT TTCACCGGCT TGCTGATGCA TTGGCAGAGC
CGTCCGCTCA AGCGCCTGGC GCGCGCCGCC CGCGACCTGG CCCTGGGCAG TCCGTCGGCA
GCGCTGGAGG AACGCGGCGC CAGCGAACTG GTGGAGGTGG CGCGCGCCTT CAACACCATG
CACGAGCGCA TCGACCGCTA CCTGAACGAG CGCGGGCAGT TGTTCAGCGC CATCTCCCAC
GACCTGCGCA CGCCGATCAC CCGCCTGCGC CTGCGGGTAG AACTCCTCGA GGACGAGCGC
TTGCAGGAGA AGTTCGGGCG CGACCTGGAC GAGCTGGAAC TGCTGGTGAA GGGCGCGCTG
CAGTGCGTGA AGGACACCGA TATCCACGAG AACGTCGAGC CGGTCGACCT CAACCTGTTG
CTCCAGCACA TCGCCGAGCC CTACCTGGCC GATGGCCGGG TGGAGGTCGT CGGTCGCGCC
GCGGAGCCTT ATCCGGGCAA GCCCCTGGCG CTCAAGCGCT GTATCGGCAA CCTGCTGGAC
AATGCGCTGA AATACGGCGA ACGCGCCCGC CTGAGCCTGG AGGACGGACC GGAAGCGGTG
GTGCTGCACG TCGACGACGA CGGCCCCGGC GTGCCCGAGC AGCGCCTGGA ACAGATCTTC
GAGCCGCGCT TCCGCCTGTC TCCGCGAGGG CAGGGCTACG GGCTGGGCCT GGGCATCGCG
CGCAACATCG CGCACACCCA TGGCGGCGAA GTCAGTTTGC AGAACCGTCG CGAGGGCGGC
CTGCGGGTCA GCCTGCGCTT GCCGCGCCTG GGGCTGGAGT GA
 
Protein sequence
MPRSLLGRML LLTLLAVLVA QGLSSLFWLS HLRSSQREGL LTSSRSLAYS MAASVSYFRS 
LPLGYRPLVL DQLRSMGGTR FFVSLNDRPL EMRALPDTPN KQAVLEIVQD VLHQRLGKEV
ELQVEFVSPD ELRLFNGALK LDELPRSWAH YALTLEPVNP PVLVTQIRIG DSEWLYIASL
MPAPYVSLEP EGLQPQQVLS IVFTSLLLLL FTGLLMHWQS RPLKRLARAA RDLALGSPSA
ALEERGASEL VEVARAFNTM HERIDRYLNE RGQLFSAISH DLRTPITRLR LRVELLEDER
LQEKFGRDLD ELELLVKGAL QCVKDTDIHE NVEPVDLNLL LQHIAEPYLA DGRVEVVGRA
AEPYPGKPLA LKRCIGNLLD NALKYGERAR LSLEDGPEAV VLHVDDDGPG VPEQRLEQIF
EPRFRLSPRG QGYGLGLGIA RNIAHTHGGE VSLQNRREGG LRVSLRLPRL GLE