Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22860 |
Symbol | |
ID | 4381191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1983607 |
End bp | 1984599 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639324397 |
Product | putative transcriptional regulator |
Protein accession | YP_789982 |
Protein GI | 116051187 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.184233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGT CCGATCCCCA CGAACTCGCC ACCCTGCTCG AAGGCATCCT CCTCGCGGCC GGCAAGCCGC TGTCGCTGGA GCGCCTGGCC GAGCTGTTCG ACGAGGCCGA GCGGCCGGAA CCGGGGCAGT TCCGCGACGC CCTGGCGATC CTCGCGCTGT CCTGCGCGGG GCGTTCCTTC GAGCTGAAGG AAGTCGCGTC CGGGTATCGC CTGCAGATTC GCGAGCGTTT CTCGCCGTGG GTCGGCCGCC TCTGGGAGGA GCGTCCGCAG CGCTATTCGC GCGCGCTCCT GGAAACCCTG GTGCTGATCG CCTACCGCCA GCCGATCACC CGTGGCGAGA TCGAGGAGAT CCGCGGCGTG GCGGTGAACA CCCAGATCGT CAAGACGCTG ATGGAGCGGG AGTGGATCCG CATCGTTGGC TACCGCGAGG TGCCGGGGCG CCCGGCGATG CTGGCGACCA CCAAGGCGTT CCTCGATTAT TTCAACCTGA AGAGCCTCGA CGAGCTGCCG CCGCTGTCGG CGCTGCGCGA GATGGAGCCC GAGCCGGAAC CGCCGGTCGA AGTGGCGGCG CAGCCGCCGC GCGACGATCT CGACGAGGAT GCGATTCCTG CCTCGATCCA GGCCCTGGCC GATCGCGCCA TCGCCGAGGC CGGGGAAAGC CTCGAGGAGA TCGAGGGGGA GGCCGGCGAG CCGGAGAAGC CGCGCGAGGA AACCAGCTTC CGCAGCCTGC TGCTGGAACT GGACGAGATG GAGCAGGGCC TGAAGACCGA CTTCGACGAC CTGCTCGACC CTCCGGAGCC CTCGGAGCAG GGCGACGAGT CCGCCGAGCC AGCGGCTGGG CCGATTCCCG TGGTCGCGGA GCAAGCCGTC GAGCCTGCCG TCGCGGAGGC TGTCGCGGGC GCCGATCCCG ATGACGAGGA GCGCGCCCTG GCGGAGGCCA TGCGCGAGGA GCGCGAGGCA CTGGACGCCG ACGACGACTG GCCGCGCCGC TGA
|
Protein sequence | MNLSDPHELA TLLEGILLAA GKPLSLERLA ELFDEAERPE PGQFRDALAI LALSCAGRSF ELKEVASGYR LQIRERFSPW VGRLWEERPQ RYSRALLETL VLIAYRQPIT RGEIEEIRGV AVNTQIVKTL MEREWIRIVG YREVPGRPAM LATTKAFLDY FNLKSLDELP PLSALREMEP EPEPPVEVAA QPPRDDLDED AIPASIQALA DRAIAEAGES LEEIEGEAGE PEKPREETSF RSLLLELDEM EQGLKTDFDD LLDPPEPSEQ GDESAEPAAG PIPVVAEQAV EPAVAEAVAG ADPDDEERAL AEAMREEREA LDADDDWPRR
|
| |