Gene PA14_22860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_22860 
Symbol 
ID4381191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1983607 
End bp1984599 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID639324397 
Productputative transcriptional regulator 
Protein accessionYP_789982 
Protein GI116051187 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.184233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT CCGATCCCCA CGAACTCGCC ACCCTGCTCG AAGGCATCCT CCTCGCGGCC 
GGCAAGCCGC TGTCGCTGGA GCGCCTGGCC GAGCTGTTCG ACGAGGCCGA GCGGCCGGAA
CCGGGGCAGT TCCGCGACGC CCTGGCGATC CTCGCGCTGT CCTGCGCGGG GCGTTCCTTC
GAGCTGAAGG AAGTCGCGTC CGGGTATCGC CTGCAGATTC GCGAGCGTTT CTCGCCGTGG
GTCGGCCGCC TCTGGGAGGA GCGTCCGCAG CGCTATTCGC GCGCGCTCCT GGAAACCCTG
GTGCTGATCG CCTACCGCCA GCCGATCACC CGTGGCGAGA TCGAGGAGAT CCGCGGCGTG
GCGGTGAACA CCCAGATCGT CAAGACGCTG ATGGAGCGGG AGTGGATCCG CATCGTTGGC
TACCGCGAGG TGCCGGGGCG CCCGGCGATG CTGGCGACCA CCAAGGCGTT CCTCGATTAT
TTCAACCTGA AGAGCCTCGA CGAGCTGCCG CCGCTGTCGG CGCTGCGCGA GATGGAGCCC
GAGCCGGAAC CGCCGGTCGA AGTGGCGGCG CAGCCGCCGC GCGACGATCT CGACGAGGAT
GCGATTCCTG CCTCGATCCA GGCCCTGGCC GATCGCGCCA TCGCCGAGGC CGGGGAAAGC
CTCGAGGAGA TCGAGGGGGA GGCCGGCGAG CCGGAGAAGC CGCGCGAGGA AACCAGCTTC
CGCAGCCTGC TGCTGGAACT GGACGAGATG GAGCAGGGCC TGAAGACCGA CTTCGACGAC
CTGCTCGACC CTCCGGAGCC CTCGGAGCAG GGCGACGAGT CCGCCGAGCC AGCGGCTGGG
CCGATTCCCG TGGTCGCGGA GCAAGCCGTC GAGCCTGCCG TCGCGGAGGC TGTCGCGGGC
GCCGATCCCG ATGACGAGGA GCGCGCCCTG GCGGAGGCCA TGCGCGAGGA GCGCGAGGCA
CTGGACGCCG ACGACGACTG GCCGCGCCGC TGA
 
Protein sequence
MNLSDPHELA TLLEGILLAA GKPLSLERLA ELFDEAERPE PGQFRDALAI LALSCAGRSF 
ELKEVASGYR LQIRERFSPW VGRLWEERPQ RYSRALLETL VLIAYRQPIT RGEIEEIRGV
AVNTQIVKTL MEREWIRIVG YREVPGRPAM LATTKAFLDY FNLKSLDELP PLSALREMEP
EPEPPVEVAA QPPRDDLDED AIPASIQALA DRAIAEAGES LEEIEGEAGE PEKPREETSF
RSLLLELDEM EQGLKTDFDD LLDPPEPSEQ GDESAEPAAG PIPVVAEQAV EPAVAEAVAG
ADPDDEERAL AEAMREEREA LDADDDWPRR