| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_22680 |
|---|
| Symbol | |
|---|
| ID | 4381205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1972347 |
|---|
| End bp | 1973492 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324383 |
|---|
| Product | putative permease of ABC transporter |
|---|
| Protein accession | YP_789968 |
|---|
| Protein GI | 116051201 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00590843 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC AGCCGCAACC CGGCCACGTG AGCCTGGATA GCTCCACCCA GCCCGCCCGC
GTCAGAGCCA TAGGTGATTG GACGCTCGCC CACTACACGG CTCTGGAGCG CGAGGTGACG
CGCCTGCGCA GCGAAGTGGC GGGCAACGCC AGCTTCGACC TGAGCCAACT GGGCGCCCTG
GATACCGCCG GCGCCGCCCT GCTCGCCGAA TTGCTCGGCG CCGAGCGCCT GGCCGACCTC
GCCGAGCTGG AGCCCGGCCT GCCGCGCGAG CGCCAGGCCC TGCTGAAGAC CGTCGGCCAC
GCCCTGCACG ACTTCTGCGA GCCGGAGAAA CCCAAGCCGC CGACCACCGC CATCGAACTG
CTGGCTCGCA TCGGTTGTGC CATGGAGACC TTCTGGCTGC ACCTCAAGGC ACTCCTCGGC
TTCATCGGCC TGACCCTGGA GACCCTGTTC CGCAGCCTGG TCCGCCCGGC CAGTTGGCGG
GTCACGCCGC TGGTGGCGAA CATCGAGAAG AGCGGCCTGG ACGCGGTGCC GATCATCGCC
CTGCTGACCT TCCTGGTCGG CGCGGTGATC GCCTTCCTCG GCGCCACGGT GCTGGCCAAC
TTCGGCGCGA CCATCTACAC GGTCAACCTG GTGGTGTTCT CCTTCCTCCG CGAGTTCGCC
GTGCTGCTCA CCGCGATCCT CATGGCCGGC CGCACCGCCA GCGCCTTCAC CGCGCAGATC
GGTTCGATGA AGGCCAACGA GGAGATCGAC GCGATCCGCG CCCTCGGCCT CAACCCCATC
GAGCTGCTAG TGCTGCCGCG GGTGCTGGCG CTGCTGGTAT CGCTGCCGAT GCTGACCTTC
GTCGGCATGC TCTGCGGCAT CGTCGGCGGC ATGACCGTCT GCGCCTGGAC CCTGGACATC
CCGCCGGCGA TGTTCCTGTC GATCATGGAG GACGGAATCG GCGTACAGCA TTTCCTGGTC
GGTATCAGCA AGGCCCCGCT GTTCGCCTTC CTGATCGCCG TGATCGGCTG CCTGGAAGGC
TTCAAGGTCA GCGGCAGCGC CCAGTCGGTG GGCGAGCACA CCACCACCAG CGTGGTCCAC
TCGATCTTCG TGGTGATCCT GCTCGACGCC CTCGCCGCGC TGTTCTTCAT GGAGATGGGC
TGGTGA
|
|---|
| Protein sequence | MTTQPQPGHV SLDSSTQPAR VRAIGDWTLA HYTALEREVT RLRSEVAGNA SFDLSQLGAL
DTAGAALLAE LLGAERLADL AELEPGLPRE RQALLKTVGH ALHDFCEPEK PKPPTTAIEL
LARIGCAMET FWLHLKALLG FIGLTLETLF RSLVRPASWR VTPLVANIEK SGLDAVPIIA
LLTFLVGAVI AFLGATVLAN FGATIYTVNL VVFSFLREFA VLLTAILMAG RTASAFTAQI
GSMKANEEID AIRALGLNPI ELLVLPRVLA LLVSLPMLTF VGMLCGIVGG MTVCAWTLDI
PPAMFLSIME DGIGVQHFLV GISKAPLFAF LIAVIGCLEG FKVSGSAQSV GEHTTTSVVH
SIFVVILLDA LAALFFMEMG W
|
|---|
| |