Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22650 |
Symbol | |
ID | 4381208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1969975 |
End bp | 1970619 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639324380 |
Product | putative ABC-type uncharacterized transport system |
Protein accession | YP_789965 |
Protein GI | 116051204 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00248211 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGCTCG CCCTTCGCCC GCTGCGTCGC CTGTCCCTGG CCGCCGGCCT GGCCGCGCTC GCCACCCTCG GCGCCTGCTC GATCCTGCCG GAAGCGCAGG TCCTCCAGGT CTACCTGCTA CCGGTGCACA ACCCTCCGGC CAGCGCCGCC GCGCGGCCGG TCGACTGGTC GCTGCGGATC GCCCGGCCGC GTACCAGCCT GGTGCTGGAG AGCCCGCGCA TCGCAGTGCG CCCGCACGGC GACGAAATCA GCGTGTACCA GGGCGCGCGC TGGAGCGATC CGGCACCGTC GCTGCTGCGT GACCGTCTGA TGCAGGCGTT CCAGGCCGAC GGCCGGGTCC GCGGCCTGAG CAGCGACGAC AGCAACCTGC AGGCCGATTT CGAACTGGGC GGCGACCTTC GCGCCTTCCA GACCGAGTAC CCGAACGGCC AGGCCAGCGC GCTGATCCGC TACGACGCGC GCCTGGTGCG TACCGACGAC AAGCGCGTGG TCGCCAGCCG GCGTTTCGAG GTCAGCCAGC CGGTGGATGG CAAGAAGGTC GCGGCGGTGG TCAGCGCCTT CGGCAAGGCC GGCGATACGC TGTCGGCCCA GGTTCTCGAC TGGACCCTGC GCCAGGCCTC GGCGCAACCC GCCGTGCAGC CCTGA
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Protein sequence | MRLALRPLRR LSLAAGLAAL ATLGACSILP EAQVLQVYLL PVHNPPASAA ARPVDWSLRI ARPRTSLVLE SPRIAVRPHG DEISVYQGAR WSDPAPSLLR DRLMQAFQAD GRVRGLSSDD SNLQADFELG GDLRAFQTEY PNGQASALIR YDARLVRTDD KRVVASRRFE VSQPVDGKKV AAVVSAFGKA GDTLSAQVLD WTLRQASAQP AVQP
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