Gene PA14_22650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_22650 
Symbol 
ID4381208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1969975 
End bp1970619 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID639324380 
Productputative ABC-type uncharacterized transport system 
Protein accessionYP_789965 
Protein GI116051204 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00248211 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCTCG CCCTTCGCCC GCTGCGTCGC CTGTCCCTGG CCGCCGGCCT GGCCGCGCTC 
GCCACCCTCG GCGCCTGCTC GATCCTGCCG GAAGCGCAGG TCCTCCAGGT CTACCTGCTA
CCGGTGCACA ACCCTCCGGC CAGCGCCGCC GCGCGGCCGG TCGACTGGTC GCTGCGGATC
GCCCGGCCGC GTACCAGCCT GGTGCTGGAG AGCCCGCGCA TCGCAGTGCG CCCGCACGGC
GACGAAATCA GCGTGTACCA GGGCGCGCGC TGGAGCGATC CGGCACCGTC GCTGCTGCGT
GACCGTCTGA TGCAGGCGTT CCAGGCCGAC GGCCGGGTCC GCGGCCTGAG CAGCGACGAC
AGCAACCTGC AGGCCGATTT CGAACTGGGC GGCGACCTTC GCGCCTTCCA GACCGAGTAC
CCGAACGGCC AGGCCAGCGC GCTGATCCGC TACGACGCGC GCCTGGTGCG TACCGACGAC
AAGCGCGTGG TCGCCAGCCG GCGTTTCGAG GTCAGCCAGC CGGTGGATGG CAAGAAGGTC
GCGGCGGTGG TCAGCGCCTT CGGCAAGGCC GGCGATACGC TGTCGGCCCA GGTTCTCGAC
TGGACCCTGC GCCAGGCCTC GGCGCAACCC GCCGTGCAGC CCTGA
 
Protein sequence
MRLALRPLRR LSLAAGLAAL ATLGACSILP EAQVLQVYLL PVHNPPASAA ARPVDWSLRI 
ARPRTSLVLE SPRIAVRPHG DEISVYQGAR WSDPAPSLLR DRLMQAFQAD GRVRGLSSDD
SNLQADFELG GDLRAFQTEY PNGQASALIR YDARLVRTDD KRVVASRRFE VSQPVDGKKV
AAVVSAFGKA GDTLSAQVLD WTLRQASAQP AVQP