| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_22590 |
|---|
| Symbol | |
|---|
| ID | 4383118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1965017 |
|---|
| End bp | 1965829 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639324375 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789960 |
|---|
| Protein GI | 116051209 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0224054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.000235612 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CGCAACGCTT CACCTCGAAC CGCAAGCAGC GGGTTCGGAC CCTGTGGATC
TCGGATGTCC ACCTGGGGAC GCGGGATTGC CAGGCCGAAC ACCTGGCGGC GTTCCTCAAG
CGCTACCACG CCGATCGCAT CTACCTGGTG GGCGACATCA TCGACGGCTG GAAGCTGCGC
GGCGGCATCT ACTGGCCGCA GGCGCACACC AACGTGATCC GCCGCCTGCT CACCCTGAGC
AAGCGCGGCA CCGAGGTGAT CTACGTCACC GGCAACCATG ACGAATTCCT GCGCCGCTAT
TCGAGCCTGA TCCTCGGCAA CATCCGCCTG GTCGACGAGG CGGTGCACAG TACCGCCGAC
GGCCGCAAGC TGCTGGTGAT ACACGGCGAC CAGTTCGACG TGATCACCCG CTACCACCGC
TGGCTGGCGT TCCTCGGCGA TTCCGCCTAC GAGTTCACCC TGCTCCTCAA CCGTTGGCTG
AACCACTGGC GGCGGCGCTG GGGCTACGGC TACTGGTCGC TGTCGGCGTA CCTCAAGCAC
AAGGTCAAGA CCGCGGTGAA CTTCATCAGC GACTTCGAGG AAGCCATCGC CCACGAGTGC
CACAAGCGCG GGCTCGACGG GGTGGTCTGC GGGCACATCC ACCATGCCGA GATCCGCCGC
ATCGAGGGCG TCGATTACCT CAACTGCGGC GACTGGGTAG AATCCTGCAC GGCGCTGATC
GAACATTGGG ACGGCAGCAT CCAGCTCTAC CGCCTGGCCG AGGAGCAGGC GCGGCTGGCG
GCGCAGGCCG CGGCGGTCGA GCCGGCGGCA TGA
|
|---|
| Protein sequence | MSTAQRFTSN RKQRVRTLWI SDVHLGTRDC QAEHLAAFLK RYHADRIYLV GDIIDGWKLR
GGIYWPQAHT NVIRRLLTLS KRGTEVIYVT GNHDEFLRRY SSLILGNIRL VDEAVHSTAD
GRKLLVIHGD QFDVITRYHR WLAFLGDSAY EFTLLLNRWL NHWRRRWGYG YWSLSAYLKH
KVKTAVNFIS DFEEAIAHEC HKRGLDGVVC GHIHHAEIRR IEGVDYLNCG DWVESCTALI
EHWDGSIQLY RLAEEQARLA AQAAAVEPAA
|
|---|
| |