| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_22570 |
|---|
| Symbol | csaA |
|---|
| ID | 4383120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1963706 |
|---|
| End bp | 1964041 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639324373 |
|---|
| Product | CsaA protein |
|---|
| Protein accession | YP_789958 |
|---|
| Protein GI | 116051211 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain |
|---|
| TIGRFAM ID | [TIGR02222] export-related chaperone CsaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.00335584 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0000447955 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA TCGAATGGCA GGATTTCGAA CGCGTCGAAC TGCGCGTCGG CACCATCCTC
AGCGCCGCTC CCAACCCCAA GGCACGCAAA CCCGCCTATG TCCTCGAGGT CGACCTCGGA
CCGCTCGGCC TGCGCACCTC CAGCGCGCAA CTGACCGCAC ACTACCAGGC CGAGCAACTG
GTCGGACGCC AGGTCCTCTG CGTCTGCAAC TTCGCTCCGA AGCAGATCGC CGGGGTGCGC
TCGGAGGTCC TGGTCACCGG GGTCTACGAT AGCGAGGACA AGGTGGTCCT GGCCGGCTTC
GACAAGCCCC TGCCCAACGG TGCGCGCCTG GCCTGA
|
|---|
| Protein sequence | MDIIEWQDFE RVELRVGTIL SAAPNPKARK PAYVLEVDLG PLGLRTSSAQ LTAHYQAEQL
VGRQVLCVCN FAPKQIAGVR SEVLVTGVYD SEDKVVLAGF DKPLPNGARL A
|
|---|
| |