Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22100 |
Symbol | |
ID | 4381236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1926578 |
End bp | 1927303 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639324333 |
Product | hypothetical protein |
Protein accession | YP_789918 |
Protein GI | 116051251 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000406161 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 3.23411e-22 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGTCGGGA TTAACTCTCA AGGTAATGAT TACCTTCTAG AACAACTCAA AACTTGCATG CCAGCCCGGG TATTGAGAGT AGCCTCACAA GAAGAGCTTA GGGTAGACGT GCAACCAGTG ATTGACATTC TCCGCAAGGA TGGAGATAGC CAGCCAATCC CAACAATCCT AAACGTCCCT GTACTGATGC TAGGGGGCTC CAAGAGTCTG ATTAGCTACC CGGTAGAGGC TGGGGATTTT GTGATGCTTG TCTTCTCTCA ATTGGATATC GATAGATTTA TCGAGGGCAC TGGCACTAAT GCTCATGAGA AGACCCCATA CACAGCCCGT CGCTTCCATC TTCAAGATGC TGTTGCTATC CCGGGCCTAT TCCCATTCGG GGCTAAGGCT AACTCCCCAG CTACTCGCAC CAATCCACAC AACCCACAAG ACCTAGTTGT AACTCACAAC AAAGGAACAG GGAATGAAGT TGAGGTGCGT CTAGGCAAGG ACGGGAGCCT AACTCTGAAG AGCCCGCTCG CTGTGAATGT TGAGTCCCCT TCTGTCAGTG TGAAGACTCA AACCCTCAAG GTTGAAGCCG CTAACACTAC ATGGACAGGC AACATCACAC ACAGCGGCAA CTATGTGCAG ACTGGTGAAT CCACATTCAA CGGAATTCAG TTCAGCACTC ACAAACACGG AGGGGTTATG CCGGGAGGCG GAACAACGTC CGTCCCTCAA CCCTAA
|
Protein sequence | MVGINSQGND YLLEQLKTCM PARVLRVASQ EELRVDVQPV IDILRKDGDS QPIPTILNVP VLMLGGSKSL ISYPVEAGDF VMLVFSQLDI DRFIEGTGTN AHEKTPYTAR RFHLQDAVAI PGLFPFGAKA NSPATRTNPH NPQDLVVTHN KGTGNEVEVR LGKDGSLTLK SPLAVNVESP SVSVKTQTLK VEAANTTWTG NITHSGNYVQ TGESTFNGIQ FSTHKHGGVM PGGGTTSVPQ P
|
| |