| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21880 |
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| Symbol | tsp |
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| ID | 4381255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1902163 |
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| End bp | 1904259 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639324313 |
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| Product | periplasmic tail-specific protease |
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| Protein accession | YP_789898 |
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| Protein GI | 116051270 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0932853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00000629787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTT TTCTGCCCCG TACCGCCCTG TTGCTCCTCC TCGGCGCCAG TTCGCTGCCG
CTGTTCGCCT CGACCGCCGT CTCCGTCGGC AGCGCCCAGA ATTCCTGGGA CAGCCTGCAG
CCGGACCGCG AGCAGGTCAT CGCCAGCCTC AACGTAGTGG AGCTGCTCAA GCGGCACCAC
TACAACAAGC CGCCGCTGAA CGATGAACGC TCGGCCAAGA TCTACGACAG CTACCTGAAG
ATGCTCGATC CGGCGCGGAT GTACTTCACC GCCGGCGACA TCGCCGAGTT CGATCGCTGG
CGCAACAGGT TCGACGACTT CCTCAAGAGC GGCGATCTCG ATCCCGGCTT CGTCATCTAC
AAGCGTCACC TCGACCGCCT GAAAGGCCGT CTCGACTACG CCCTGGCGAT GCTCGACAAG
GGCGTCGACA AGATCGACTT CAGCGTCGAC GAGAGCCTGC TGATCGACCG CGAGAAGGCC
CCCTGGGCGA AGGACACCGC AGAGCTCGAC GACCTCTGGC GCAAGAAGGT GAAGGACGAG
GTCCTGCGCC TGAAGATCAC CGGCAAGGAC GACAAGGCGA TCCAGGAACA GCTCACCAAG
CGCTACAAGA ACCAGCTGTC GCGCCTGAAG CAGACCCGCA GCGAAGACAT CTTCCAGGCC
TACATCAACG CCTTCGCCCA GTCCTACGAT CCGCACACCC AGTACCTGTC GCCGGACAAC
GCGGAAAACT TCGACATCAA CATGAGCCTC TCGCTGGAAG GCATCGGCGC GGTGCTGCAG
AGCGACAACG ACTACGTCAA GGTCGTACGC CTGGTGCCGG CCGGCCCGGC GGCGAAGAGC
AAGCAGATCG CCACCTCCGA CAAGATCATC GGCGTCGCCC AGGGCAAGGG CGAAATGGTC
GACGTGGTCG GCTGGCGCCT GGATGAAGTG GTCAAGCTGA TCCGCGGGCC GAAAGGCTCC
CAGGTACGCC TGGAAGTGAT TCCGGCGAGC AACGCGCCGA ACGACCAGAC CAGCAAGATC
GTCGCCATCA CCCGCGAGGC GGTGAAGCTG GAGGACCAGG CGGCGAAGAA ATCCATCATC
AAGGTCGACC ACGAAGGCCG CAGCTACAAG CTCGGCGTGA TCGACCTGCC GGCCTTCTAC
CTGGACTTCA AGGCCTACCG CGCCGGCGAC CCGAACTACA AGAGCACCAC CCGCGACGTG
AAGAAGCTGG TCGCCGAATT GCAGAAGGAC AAGGTCGACG GCATCGTCCT CGACCTGCGC
AACAACGGCG GCGGCTCCCT GCAGGAAGCC ACCGAGCTGA CCGGCCTGTT CATCGACCAG
GGCCCGACCG TACTGGTGCG CAACAGCGAC GGCCGCGTCG ACGTGCTCAA CGACGACGAA
GGCAAGGCCT TCTATACCGG CCCGCTGGCG GTGCTGGTCA ACCGTCTCTC GGCCTCCGCC
TCGGAGATCT TCGCCGGCGC CATGCAGGAC TACCACCGCG CGCTGATCCT CGGTGGACAG
ACCTTCGGCA AGGGCACCGT GCAGACCATC CAGCCGCTCA ACCACGGCGA ACTGAAGCTG
ACCCTGGCGA AGTTCTACCG TGTCTCCGGG CAGAGCACCC AGCACCAGGG CGTGATCCCG
GACATCAGCT ACCCGTCCAT CGTCGACGAC AAGGAAATCG GCGAAAGCGC CCTGCCCGAC
TCGATGCCCT GGGACACCAT CCGCCCGGTG GTGAAGGACG AGGCCAACCC GTTCAAGCCG
TTCCTCGCGC AACTCAAGGC CCAGCACGAC GCGCGCACCG AGAACAACGC CGACTTCGTC
TACGCCCGCG AGCGCCTGGC GCTGGCCCAG GAGCTGATGA AGGAGAAGAC CGTCAGCCTG
AACGAGGCCA AGCGCCGCGC CCAGCAGACC AGCATCGAGA ACCGCCAGTT GGCCATGGAG
AACGCCCTGC GCAAGTCCAA GGGCCAGGAG CCGCTGAAGG AACTCAAGCG CGAGGACGAG
AACGCCCTGC CGGAAGAGGA CGACAAGACC AAGCCGCAGG ACGACGCCTA CCTCACCGAG
TCCGGGCACA TCCTGCTGGA CTACCTGAAC CTCAACTCGG CGGTGGCCAA GCACTGA
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| Protein sequence | MKRFLPRTAL LLLLGASSLP LFASTAVSVG SAQNSWDSLQ PDREQVIASL NVVELLKRHH
YNKPPLNDER SAKIYDSYLK MLDPARMYFT AGDIAEFDRW RNRFDDFLKS GDLDPGFVIY
KRHLDRLKGR LDYALAMLDK GVDKIDFSVD ESLLIDREKA PWAKDTAELD DLWRKKVKDE
VLRLKITGKD DKAIQEQLTK RYKNQLSRLK QTRSEDIFQA YINAFAQSYD PHTQYLSPDN
AENFDINMSL SLEGIGAVLQ SDNDYVKVVR LVPAGPAAKS KQIATSDKII GVAQGKGEMV
DVVGWRLDEV VKLIRGPKGS QVRLEVIPAS NAPNDQTSKI VAITREAVKL EDQAAKKSII
KVDHEGRSYK LGVIDLPAFY LDFKAYRAGD PNYKSTTRDV KKLVAELQKD KVDGIVLDLR
NNGGGSLQEA TELTGLFIDQ GPTVLVRNSD GRVDVLNDDE GKAFYTGPLA VLVNRLSASA
SEIFAGAMQD YHRALILGGQ TFGKGTVQTI QPLNHGELKL TLAKFYRVSG QSTQHQGVIP
DISYPSIVDD KEIGESALPD SMPWDTIRPV VKDEANPFKP FLAQLKAQHD ARTENNADFV
YARERLALAQ ELMKEKTVSL NEAKRRAQQT SIENRQLAME NALRKSKGQE PLKELKREDE
NALPEEDDKT KPQDDAYLTE SGHILLDYLN LNSAVAKH
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