| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21870 |
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| Symbol | |
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| ID | 4381256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1900319 |
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| End bp | 1902124 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639324312 |
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| Product | EAL domain/GGDEF domain-containing protein |
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| Protein accession | YP_789897 |
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| Protein GI | 116051271 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.220571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00056029 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAATACG GGGCCGGTTG CACAACCGGC CCTTTTTCAT TGCGACGAGA GCGTTCCATG
ACCGTCACCG AGCAGTTGAG CGCCCTGGAC AGCATCCTGG CCCACGGCGA CCTGCACTGC
CTGTTCCAGC CCATCCTCTC GCTTTCCGAA CGGCGTCTGG TCGGCTACGA AGCGCTAACC
CGCGGTCCGT CCAACAGCCC GCTGCACTCG CCCCTGGCGT TGTTCGCCGT GGCCCGCCAA
TGCGGACGGC TGAGCGAACT GGAACTGCTC TGCCGACAAC GCGCCTTCAG CCGCTTCCGC
GACATCCAGG GCGACGCCAT GCTGTTCCTC AACGTCTCTC CGGAGTCCCT CCTCGAAGCC
GGCCATCCGC CCGGCCGCAC CCTGCAATTG CTGCAACAGC TGGGGATCTC GCCGAACCGG
GTGGTGATCG AACTGACCGA ACAGACCCCC ATCGACGACT TCGACCTGCT CGACACCGCG
CTGCACCACT ATCGCGCCAT GGGCTTCTCC ATCGCCCTCG ACGACCTCGG CGCTGGCTAC
TCCAGCCTGC GCCTGTGGTC GGAACTGCGT CCGGACTACG TGAAGATCGA CCGCCACTTC
GTCGACGGCA TCCACCTGGA CACCGTGAAA CGCGAGTTCG TCGGCTCCAT CCTGAAGATG
GCCCGAGCCT CTCGCGCCCA GGTCATCGCC GAAGGCATCG AACTGCCCGA GGAACTGGCG
GTGCTTAGCG AGATGGGGGT TGACCTGGTG CAAGGCTATC TGTTCGGCCG CCCGCAGGAA
CACCCGGCAA GCGACGTACA ACAGATGCTG CCCAGCGCTG GCGCCCCCAG CCAGTCTTCC
AGCGACGAGC ATGGCGACCT GCGTGCGCTG CTGCTGGAAC AGCGCGCGGT CGACGTTCGC
ACCTCGACCC AGGAAGTGGT GGAAATCTTC CGCCGCCAGG CCAACCTGAA CTCCCTGGCG
ATCCTCGACG AAGAGGGGCG TCCCATCGGC ATCGTCCATC GCCACGCGCT CACCGACGCC
TTGCTCCGGC CCTTCGCCTG CGACCTGTTC CTGCGCAAGC CGATCAGCCG CCTGATGAGC
GACGATTTTC TCGCCGCGGA ACTCGGCCAG ACCCTGCAGC AGGTCAGCCG CCTGCTGACC
AGCCGCGCAC GCCAGCGTAT CGAGGAAGAT TTCATCGTCA CCCGCGGCGG GCACTATGCG
GGCATGGGCC GGGTGATCGA CGTGCTCAGG CTGATCACCG AGGAAAAGCT CCAGCAGGCG
CGGCACGCCA ATCCGCTCAC CTTGCTTCCC GGCAACGTGC CGATCCAGCA ATGCCTCGAA
CGCCTGCTGC AACAAAGGCG CGAGGCGGTG ATCTGCTACA TCGACATCGA CAGCTTCAAA
CCCTTCAACG ATCTCTACGG CTACGCCCGC GGCGACGAGG TCCTGCTGTG CCTGGCACAG
TGCCTGAGCG AACGGATCGA CCCGGGCAGC GACTTCGTCG GCCATATCGG CGGTGACGAC
TTCATGCTGG TGCTCGGCCC CGAGGACTGG CGCACACGGA TCGACCGGTT GCTGGAAACC
TTCCAGAGCC AATGCCGGCG CTTCTACAGC CGCGAGCACC TGGAAGCCGG CTGTTTCGTT
GCGCACAACC GCCATGGCCA GCGCGAGGAG TACCCGCTGC TGTCATTGTC CGTCGGCGTG
GTGCATCTAC CGGCCGAAGC CTGTCAGGGA ATGGATGCCG CGCACCTGGC GACGCTGGCC
TCCGAGGCCA AGCGCCAGGC CAAGGCGGTG CCAGGCTACA GCCTGCACCT GATCGAGGCC
GCCTGA
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| Protein sequence | MKYGAGCTTG PFSLRRERSM TVTEQLSALD SILAHGDLHC LFQPILSLSE RRLVGYEALT
RGPSNSPLHS PLALFAVARQ CGRLSELELL CRQRAFSRFR DIQGDAMLFL NVSPESLLEA
GHPPGRTLQL LQQLGISPNR VVIELTEQTP IDDFDLLDTA LHHYRAMGFS IALDDLGAGY
SSLRLWSELR PDYVKIDRHF VDGIHLDTVK REFVGSILKM ARASRAQVIA EGIELPEELA
VLSEMGVDLV QGYLFGRPQE HPASDVQQML PSAGAPSQSS SDEHGDLRAL LLEQRAVDVR
TSTQEVVEIF RRQANLNSLA ILDEEGRPIG IVHRHALTDA LLRPFACDLF LRKPISRLMS
DDFLAAELGQ TLQQVSRLLT SRARQRIEED FIVTRGGHYA GMGRVIDVLR LITEEKLQQA
RHANPLTLLP GNVPIQQCLE RLLQQRREAV ICYIDIDSFK PFNDLYGYAR GDEVLLCLAQ
CLSERIDPGS DFVGHIGGDD FMLVLGPEDW RTRIDRLLET FQSQCRRFYS REHLEAGCFV
AHNRHGQREE YPLLSLSVGV VHLPAEACQG MDAAHLATLA SEAKRQAKAV PGYSLHLIEA
A
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