| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21780 |
|---|
| Symbol | |
|---|
| ID | 4381263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1894225 |
|---|
| End bp | 1895160 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639324303 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_789890 |
|---|
| Protein GI | 116051278 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.919713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.169757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCC TGACCGCCCT GAGCCGTTTC GTCAGCGCCA GCTTCCCGTT CTGGGTCCTG
CTGTTCGCCA TCCTCGCCTT CTTCCGGCCG GCCTGGTTCC TCCCGCTCAC CGTCGCCATC
GCGCCGCTGC TCGGCCTGGT GATGTTCGGC ATGGGCCTGA CGCTCAAGGG CGAAGACTTC
CGCGAGGTCG CCCGGCACCC CATACGGGTG CTGATCGGCG TGCTGGCCCA GTTCGTCATC
ATGCCCGGCC TGGCCTGGCT GCTCTGCCGC CTGTTGCAGT TGCCGGCGGA GATCGCGGTG
GGCGTGATCC TGGTCGGCTG CTGCCCCGGC GGCACCGCTT CCAACGTGAT GACCTGGCTG
TCCCGTGGCG ATGTCGCCCT GTCGGTGGCG ATCACCTCGG TGACCACCCT GCTCGCCCCG
CTGGTCACGC CGGCGCTGGT CTGGCTGCTG GCCTCGGCCT GGCTGCCGGT GTCATTCGCG
GCGATGTTCC TGTCGATCCT CCAGGTGGTG CTGATGCCCA TCGCCCTCGG CCTGCTGGCA
CAGCGCCTGC TCGGCGAGCG CACCCGGCAG GTGGCGGAGG TGCTGCCGCT GGTCTCGGTA
TTCAGCATCG TGGTGATCAT CGCCGCGGTG GTGGCCGCCA GCCAGGCGCG GATCGCCGAG
TCCGGCCTGC TGATCATGGC CGTGGTGATG CTGCACAACG GCTTCGGCCT GTCGCTCGGC
TATCTCACCG GCAAGCTGAC CGGCATGCCG CTGGCACAGC GCAAGGCCCT GGCCATCGAA
GTCGGCATGC AGAACTCGGG GCTCGGCGCG GCGCTGGCCA ACGCCCATTT CTCGCCCCTG
GCAGCGGTGC CCAGCGCGCT GTTCAGCGTC TGGCACAATC TCTCCGGTTC GCTGCTGGCC
GCCCTGTTCC GGCGTATGGA AGATACGCCG CGTTGA
|
|---|
| Protein sequence | MRALTALSRF VSASFPFWVL LFAILAFFRP AWFLPLTVAI APLLGLVMFG MGLTLKGEDF
REVARHPIRV LIGVLAQFVI MPGLAWLLCR LLQLPAEIAV GVILVGCCPG GTASNVMTWL
SRGDVALSVA ITSVTTLLAP LVTPALVWLL ASAWLPVSFA AMFLSILQVV LMPIALGLLA
QRLLGERTRQ VAEVLPLVSV FSIVVIIAAV VAASQARIAE SGLLIMAVVM LHNGFGLSLG
YLTGKLTGMP LAQRKALAIE VGMQNSGLGA ALANAHFSPL AAVPSALFSV WHNLSGSLLA
ALFRRMEDTP R
|
|---|
| |