Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21610 |
Symbol | oprO |
ID | 4381279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1872900 |
End bp | 1874216 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639324287 |
Product | pyrophosphate-specific outer membrane porin OprO precursor |
Protein accession | YP_789874 |
Protein GI | 116051294 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3746] Phosphate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTA AGCACTCGCT CGGCTTCGTT GCCAGCGCTC TGGCTCTGGC CGTATCTGCC CAGGCGTTCG CCGGCACCGT GACCACCGAC GGCGCCGATA TCGTGATCAA GACCAAGGGC GGCCTCGAAG TCGCCACCAC CGACAAGGAA TTCAGCTTCA AGCTGGGCGG TCGCCTGCAG GCCGACTACA GCCGTTTCGA CGGTTTCTAT ACCAAGAATG GCAACACCGC CGACGCCGCC TACTTCCGCC GCGCCTTCAT CGAACTCGGC GGCACCGCGT ACAAGGACTG GAAATACCAG ATCAACTTCG ACCTGTCGCA CAACACCGGC AGCTCCGACA ACGGCTATTT CGACGAAGCT TCGGTCACTT ACACCGGCTT CAACCCGGTC AACCTGAAGT TCGGTCGCTT CGACCCCGAC TTCGGCCTGG AAAAGGCCAC CAGCTCCAAG TGGGTGACCG CTCCCGAGCG TAACGCCGCC TACGAACTGG CCGACTGGAT CAACACCCAC CAGGACGGCA TGGGCGCCCA GGTCAACTCG ACCCTCGCCG ACATGGCCTA CCTGTCCGCC GGCGTATCCG CCAAGGACGC CGACGACAGC GACGGCGACA GCGTCAAGCA GTTCAACTTC CGCGGCGTGT TCGCGCCGAT GCACGAAGCC GGCAATGTTC TGCATGTCGG CGTGAACTAT GCCTACCGCG ACCTCGACGA CACCGCCTTC GACTCGCGCA TCCGTCCGCG CCTGGGCATG CGCGGCATCG CCACCAGCGG CGGCAACGAC GCCGGTGACA ACGGCAACCG CGCGACCTTC GGCGGTGTCT CCAACTCGCC GGCCGGTTCC TACAAGGACG ACAGCGTCTG GGGCCTGGAA GGCGCCTGGG CGATGGGCCC GTTCTCGGCC CAGGCCGAAT ACCTGGCACG CAAGCTGAAG GCCGATGACA ACGCCTACAA GGACATCAAG GCCAAGGGTT ACTACGCGCA ACTGGCCTAC ACCCTGACCG GCGAGTCCCG CCAGTACAAG CTGGAGGGCG CCAAGTTCGA CTCCGTCAAG CCGGAAAACA AGGAAATCGG CGCCTGGGAA GTGTTCTACC GCTACGACAA CATCAAGGTG GAAGACGACA ACGTCGTCGC CGATACCGCC ACTCGCGAAG TCGGCGACAC CAAGGCCAAG GCCCACAACC TGGGCGTGAA CTGGTACGTC AACGATGCGG TGAAGATCAG CGCGGCCTAC GTCAAGGCGA AGACCGACAA GATTACCAAC AACAATGGCG ACGATGACGG CGACGGCTTC GTGACCCGTT TGCAGTACGT GTTCTAA
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Protein sequence | MIRKHSLGFV ASALALAVSA QAFAGTVTTD GADIVIKTKG GLEVATTDKE FSFKLGGRLQ ADYSRFDGFY TKNGNTADAA YFRRAFIELG GTAYKDWKYQ INFDLSHNTG SSDNGYFDEA SVTYTGFNPV NLKFGRFDPD FGLEKATSSK WVTAPERNAA YELADWINTH QDGMGAQVNS TLADMAYLSA GVSAKDADDS DGDSVKQFNF RGVFAPMHEA GNVLHVGVNY AYRDLDDTAF DSRIRPRLGM RGIATSGGND AGDNGNRATF GGVSNSPAGS YKDDSVWGLE GAWAMGPFSA QAEYLARKLK ADDNAYKDIK AKGYYAQLAY TLTGESRQYK LEGAKFDSVK PENKEIGAWE VFYRYDNIKV EDDNVVADTA TREVGDTKAK AHNLGVNWYV NDAVKISAAY VKAKTDKITN NNGDDDGDGF VTRLQYVF
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