Gene PA14_21540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_21540 
Symbol 
ID4381286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1867837 
End bp1868889 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content66% 
IMG OID639324280 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_789867 
Protein GI116051301 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAGCT TCAATACCTT CGTGCGCCAG TACAACGACC AGCACGCCGA GGCCATCGCC 
AAGGGCGAAC TGGAGGCGCT GGCCGAGTCC AGCTCGGCGT TCATCGAGAA GGCGTCCGGC
ATCAAGAGCC GCTTCGTGAT GAACAAGGAA GGCATCCTCG ACCCGCAGCG CATGGTTCCG
TACCTTCCCG AGCGCAGCAA CGACGAGTGG TCGATCCTCT GCGAGATGGC CGTGGCCGCC
GCCAGGGAGG CGCTGCAGCG TGCCGGCCGC AGCGCCGCCG ACATCGACGG GGTGATCGTC
GCCTGCTCCA ACCTGCAGCG CGCCTACCCG GCGATCGCGG TGGAGGTGCA GGCCGCGCTG
GGCATCCAGG GCTACGGCTA CGACATGAAC GTGGCCTGCT CCTCGGCCAC CTTCGGTATC
CAGGCCGCCA CCACCGCGAT CCAGACCGGC CAGGCGCGGG CGATCCTGAT GGTCAACCCG
GAGATCTGCA CCGGCCACCT GAACTTCCGC GACCGCGACA GCCACTTCAT CTTCGGCGAC
GCCTGCACCG CGGTGATCGT CGAGCGCGCC GACCTGGCCG TGTCGAAGCA CCAGTTCGAC
ATCGTCAGCA CCAGGCTGCT GACCCAGTTC TCCAACAACA TCCGCAACAA CTTCGGCTTC
CTCAACCGCG CCGACGAGAG CGGTATTGGC AAGCGCGACA AGCTGTTCGT CCAGGAAGGC
CGCAAGGTGT TCAAGGATGT CTGCCCGATG GTCGCCGAGC TGATCGGCGA GCACCTGGCG
GCCAATGAAA TCCAGGTCGC CGAGGTCAAG CGCTTCTGGC TGCACCAGGC CAACCTGAAC
ATGAACCTGC TGATCACCCG CAAGCTGCTC GGCCGCGACG CCGAGGCGCA CGAGGCGCCG
GTGATCCTCG ACAGCTACGC GAATACCAGT TCCGCCGGCT CGGTGATCGC CCTGCACAAG
CACCAGGATG ACCTGCCCAG CGGCGCCATC GGGGTGCTCA GCTCGTTCGG CGCCGGTTAC
TCGATCGGTA GCGTGATCCT GCGTAAACAC TGA
 
Protein sequence
MESFNTFVRQ YNDQHAEAIA KGELEALAES SSAFIEKASG IKSRFVMNKE GILDPQRMVP 
YLPERSNDEW SILCEMAVAA AREALQRAGR SAADIDGVIV ACSNLQRAYP AIAVEVQAAL
GIQGYGYDMN VACSSATFGI QAATTAIQTG QARAILMVNP EICTGHLNFR DRDSHFIFGD
ACTAVIVERA DLAVSKHQFD IVSTRLLTQF SNNIRNNFGF LNRADESGIG KRDKLFVQEG
RKVFKDVCPM VAELIGEHLA ANEIQVAEVK RFWLHQANLN MNLLITRKLL GRDAEAHEAP
VILDSYANTS SAGSVIALHK HQDDLPSGAI GVLSSFGAGY SIGSVILRKH