Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21450 |
Symbol | |
ID | 4381313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1858574 |
End bp | 1860640 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324272 |
Product | hypothetical protein |
Protein accession | YP_789859 |
Protein GI | 116051309 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACC CGGCCAACCA GACCCACTTC AGCCTCAGCC TCGACGGCCT CCGTCACGAC CTGCAGGTTC TCGAATTCAG CGGCCACGAA GGCATCAGTC GCCCCTACCG TTTCGAACTC GAACTGGTCA GCGAGCGCGC CGGCCTCGAC CTCGAAGCGC TCATGCACCG ACCCGCCTTC CTCGCCTTCA CCCCGCAGGG CCAGGGCGTC CACGGGCTGG TCTACGGCGC CGCCCAGGCC GACGCGGGCA AGCGCCTGAC CCGCTATCGC CTCACCCTCG TGCCGCAACT GGCCTACCTC GCGCAGCGCA GCAACCAGCG GATCTTCCAG CACCTCACGG TGCCGCAGAT CGTCGCCCTG GTCCTCGAGG AGCACGGCAT CCTCGCCGAC GCCTACCGCT TCCAGCTCGG CACCCGGTAT CCCGAGCGCG AATACTGCGT GCAGTACGAC GAAAGCGACC TGCATTTCGT CCAGCGCCTC TGTGCCGAAG AGGGCATCCA TTTCCATTTC CGGCACAGCG CCGAGGCGCA CCTGCTGGTG TTCGGCGACG ACCAGACGGT GTTCCCCCGC CTGGGCCGTC CCACCGCCTA CGTGCACGAC AGCGGGCTGG TCGCCGACGA ACCGGTGATC AAGCGCTTCA GCCTGCGCCT GGCCAGCCGC ACCACGCGCA CCACCCGCCG CGACTACGAC TTCGAGAAGC CGCGGCTGCT GCTGGAGGCC GGCAACCGCC CCGCTGCCGA CGCCCCGGCC GAGCCGGACC TGGAGGACTA CGACTACCCC GGTCGCTTCG TCGATCGCCA GCGCGGCAAG CTGCTCAGCC AGCGCGCCCT GGAGCGCCAC CGCGCCGACC GGCGCCTGGG CGAAGGGGTC AGCGACCAGC CGCTGCTGGT CAGCGGGCAC TTCCTGGAGA TCGCCGAGCA CCCGCGCGCG GAGTGGAACG ACCTGTGGCT GCTCAGCGAA GTCTTCCACG AAGGCAAGCA GCCGCAGGTG CTGGAAGAGA ACGTTACCTC CGACACGTCG GCCAGCACGG ACGACTTCCA GCAGGGCTAC CGCAACCGCT TCCTCGCCAC GCCCTGGGAG GTGTTCTTCC GCCCGCCGCT GGAGCACCCG AAGCCGCGCG TGCTGGGCAG CCAGACCGCG GTGGTGACCG GCCCGCCAGG CGAGGAAATC CACTGCGACC GCTACGGCCG GGTCAGGGTG CAGTTCCACT GGGACCGCGA GGGCCAGGGC GACGACAAGA GCAGTTGCTG GCTGCGCGTA GCCAGCGGTT GGGCCGGCAA CGGCTATGGC GGCATCGTCA TTCCGCGGGT CGGCATGGAA GTGCTGGTGG ACTTCCTCGA AGGCGATCCC GACCAGCCGC TGGTCAGCGG CTGCGTCTAC CACGCCGCCC ACCCGGTGCC CTACGAGTTG CCGGCGAACC AGACCCGCAG CGTCTTCAAG AGCCTCAGCA GCCCTGGCGG CGGTGGCTAC AACGAGCTGC GCATCGAGGA TCGCAAGGGC CAGGAACAGA TCTTCGTCCA TGCCCAGCGC GACTGGGACG AGAACATCGA GCATGACCAG AAGATCCGCG TCGGCCACGA ACGCCACGAC ACCGTGGAGG CGAACAGCTA CAGCGAGTTC AAGGCCGAGG AGCATCACAC CGTGCACGGA GAGCGCAAGG TCGAGCTGAA GGCCGATGAC CATCTGACGG TCGGCGACAG CCAGCACGTG AAGCTCGGTC GTGCCTACCT GGCCAGGGCC GGGCGCGAGA TCCACCTGAA GGCCGGGCAG AAGATGGTGA TCGAGGCTGA CAGCGAACTG ACGGTGAAGG CCGGCGGCAG CTTCATCCGG CTCGACGCAA GCGGCATCGC CATCAGCGGC CCGCTGGCAC GGATCAATGC AGGCGGCGCG CCGGGAAGCG GCTCGGGGAT CGCGATCAAG ATGCCGCGGG TGCCGGGCAT GGCCGACCAG GACAGCCCCG GCGCGCCACC CGAGGCGGTC GCGGCCAACC TGCCGCCGCG GCAACCGGTT TGCGAAGAGT GCCTGCTACA GGCGAAGAAA AGAGGCCAGG CGCTCGCCGA GCGCTGA
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Protein sequence | MFNPANQTHF SLSLDGLRHD LQVLEFSGHE GISRPYRFEL ELVSERAGLD LEALMHRPAF LAFTPQGQGV HGLVYGAAQA DAGKRLTRYR LTLVPQLAYL AQRSNQRIFQ HLTVPQIVAL VLEEHGILAD AYRFQLGTRY PEREYCVQYD ESDLHFVQRL CAEEGIHFHF RHSAEAHLLV FGDDQTVFPR LGRPTAYVHD SGLVADEPVI KRFSLRLASR TTRTTRRDYD FEKPRLLLEA GNRPAADAPA EPDLEDYDYP GRFVDRQRGK LLSQRALERH RADRRLGEGV SDQPLLVSGH FLEIAEHPRA EWNDLWLLSE VFHEGKQPQV LEENVTSDTS ASTDDFQQGY RNRFLATPWE VFFRPPLEHP KPRVLGSQTA VVTGPPGEEI HCDRYGRVRV QFHWDREGQG DDKSSCWLRV ASGWAGNGYG GIVIPRVGME VLVDFLEGDP DQPLVSGCVY HAAHPVPYEL PANQTRSVFK SLSSPGGGGY NELRIEDRKG QEQIFVHAQR DWDENIEHDQ KIRVGHERHD TVEANSYSEF KAEEHHTVHG ERKVELKADD HLTVGDSQHV KLGRAYLARA GREIHLKAGQ KMVIEADSEL TVKAGGSFIR LDASGIAISG PLARINAGGA PGSGSGIAIK MPRVPGMADQ DSPGAPPEAV AANLPPRQPV CEECLLQAKK RGQALAER
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