| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21400 |
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| Symbol | hrpA |
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| ID | 4381316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1852220 |
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| End bp | 1856200 |
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| Gene Length | 3981 bp |
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| Protein Length | 1326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639324269 |
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| Product | putative ATP-dependent helicase |
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| Protein accession | YP_789856 |
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| Protein GI | 116051312 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC AGACTCCTTC CCTCGACCAA CTCGTCCGGC GCCTCGACCA GGCCCAGATC
AGCGACCGCC ACCGCTTGCG CCGGCAGCTC CACGAACTGC GCAAGCAGCC CGACGACGCG
CGCCTGGCGC AGTGGGTCGA GCGCTTCCAG GCCTCCTGCG CCAAGGTCGA GGCGCGGCGC
GCCAGCGTGC CGGCGATCCG CTACGACGAC AGCCTGCCGA TCGCCGCCAA GCGCGACGAG
ATCAAGGCCG CCATCGCCGC CCACCAGGTG GTGGTGATCG CCGGCGAGAC CGGCTCGGGC
AAGACCACCC AGTTGCCGAA GATCTGCCTG GAGCTGGGGC GCGGCATCCA CGGCCTGATC
GGCCATACCC AGCCGCGTCG GCTGGCGGCG CGCAGCGTGG CGACGCGGGT CGCGGAAGAG
ATCGGCACGC CGCTGGGCGC GCTGGTCGGC TACCAGGTGC GCTTCGAGGA CCAGAGCGAC
GACAGCACCC TGGTCAAGCT GATGACCGAC GGCATCCTCC TGGCCGAGAC CCAGCACGAC
CGCTACCTGG AGCGCTACGA CACGCTGATC GTCGACGAAG CCCACGAGCG CAGCCTGAAC
ATCGACTTCC TCCTCGGCTA CCTGAAGACC CTGTTGCACC GGCGTCCGGA CCTGAAGCTG
ATCATCACCT CGGCGACCAT CGACCTGGAG CGTTTCTCCC GGCATTTCGA CGGCGCCCCG
GTGATCGAGG TTTCCGGCCG CACCTATCCG GTGGAGACCT GGTACCGGCC GCTGGCGGCG
GAAACCGACG AGGAGGGCAA CCGGGTCGAG GACGACCTGT CGGTGGACCA GGGCATCCTC
GCCGCCCTCG ACGAGATCGC CGCCCACGAA CGCGAGGTCG GCAAGCGGCC CGGCGACGTG
CTGGTGTTCC TCCCCGGCGA GCGGGAGATC CGCGACGCCG CGGAGATGCT GCGCAAGGCC
AACCTGCGCC ACACCGAGGT GCTGCCGCTG TACGCGCGAC TGACCCCGGC CGAGCAGCAG
AAGATCTTCC AGCCGCGCCC GGGACGCAAG ATCGTGCTGT CCACCAACGT CGCGGAAACC
TCGCTGACGG TGCCGGGCAT CCGTTACGTG ATCGACAGCG GCACCGCGCG GATCAGCCGC
TACAGCTACC GCGCCAAGGT CCAGCGGCTG CCCATCGAGG CGGTGTCGCA GGCCAGCGCC
AACCAGCGCA AGGGCCGTTG CGGACGGGTC GAGCCGGGCA TATGCGTGCG CCTCTACAGC
GAGGAGGACT TCAACGCGCG TCCGGCCTTC ACCGACCCGG AAATCCTCCG CACCAACCTG
GCCGCGGTGA TCCTGCAGAT GCTGCACCTG CGCCTCGGCG ACATCGAGGC GTTCCCCTTC
ATCGAGCCGC CGGACGGCAA GGCGATCAAG GACGGCTTCA CCCTTCTGCA GGAACTGTCG
GCGGTCAACC GCGAAGGCCA GCTGACCCCG CTGGGGCGCC AACTGGCGCG CCTGCCGATC
GACCCGAGGC TGGGCCGCAT GCTGCTGGAG GCGGCCCAGC AGGGTAGCCT CGAGGAAGTG
TTGACGGTGG CCAGCGCGCT GTCCGTGCAG GACCCGCGCG AGCGTCCGGT GGAGCGGCAG
CAGGCCGCCG ACCAGGCGCA CGCGCAATGG AAGGATCCGG ATTCCGACTT CGCCGCGCTG
ATCAATCTCT GGCGTGGCTT CGAGGAACAG CGCCAGGCGC TGGGCTCCAA CGCCCTGCGC
AGCTGGTGCC GGAAGAACTT CCTCAACTAC CTGCGCCTGC GTGAGTGGCG CGACGCCCAC
CGCCAACTGA CCCTGATCTG CCGCGAACTG AAGCTGCCGT TCGGGCGTCC GGCCAAGGCC
GAGGCGCGCA AGCCGGAGGC GAAGAAAGGC GCGTCGGCCG ACAACGAACG CGAGGTACCG
GGGATCGATT ACGCGGCGGT CCACAAAGCG ATCCTGTCCG GCCTGCTCAG CCAGATCGGG
CAGAAGGCCG AGGAAGGCGA CTACCTCGGC GCTCGCCAGC GACGTTTCTG GATCCATCCG
TCCAGCGGCA TCGCTCGCAA GCGCCCGCAA TGGATCATGG CCGCGGAACT GGTGGAGACC
ACCAAGCTGT TCGCCCGAAT GGTCGCGAAG ATCGAGCCGG ACTGGCTGGA GCCGCTGGCC
GGGCACCTGA TCAAGACCAA CCACTTCGAG CCGCACTGGG AGAAGCGTCG CGGCCAGGTG
GTGGCGTTCG AGCAGGTCAC CCTCTACGGC CTCATCGTCA TCGGTCGACG TCCGGTGCAC
TATGGTCCGA TCGACCCGCC GGTGGCGCGC GAGCTGTTCA TCCGCGAAGG CCTGGTGCGC
GGCGAGATCA ACAGCCGCGC CAGGTGCCTG AGCGCCAACC GGCAGTTGCT GGAAAAGCTC
GACGAGCTGG AAGCCAAGGC ACGCCGGCGC GACATCCTGG CCGACGAGGA AACCCTGTTC
GCCTATTACG ACGCGCGCCT GCCGGCGGAC ATCTACCAGA CCGCCAGTTT CGAGAAATGG
TACGCCCGCG AGCGGCAGAA CCAGCCGGAC CTGCTGCTGA TGCGCGAGGA AGACGTGCTG
GCCCGCGAAG CCAGCGAAGT CACTGCGGCG CAGTACCCGG ATCGCCTGCG CCTGGGCGAT
CTGCACCTGT CGCTGAGCTA CCAGTTCGAG CCCGGCACCG CGCGCGACGG CGTCACCGTG
CGGGTACCGG CGCCGCTGCT GCCGCAATTG CCGGCCGAAC GCATCGACTG GCTGGTGCCC
GGCCTGCTCT ACGACAAGGC GGTGGCGCTG GTGCGCAACC TGCCGAAGGC GATCCGCAAG
AGCTTCGTGC CGGTACCGGA CTTCGTCCGC GCCGCCCTGG AGCGCATCAC CTTCGGCGAA
GGTTCGCTGC CGCAGGCGCT GGGCCGCGAG CTTCAGCGCA TGACCGGCGT GCGGGTAGCC
GATGAGGCCT GGGCCGAGGC GGCGACGCAG TTGGACGATC ACCTGCGGAT GAACATCGAG
GTGGTCGACG CCCAGGGCAA GTTCCTCGGC GAGGGCCGCG ACCTGGCCGA ACTCACCGCG
CGTTTCGCCG AAGCCAGCCA GGCGGCCCTG GCGATACCCC AGGCCGACAA GGAACAGCAG
CGTCCGGTGG AGGCCAAGGC CTTCGCCAGC GTCGCCGAGA AAGCCCAGCA GAAGGTCGCC
GGATTGTCGA TGACGGTATA CCCGGCGCTG GTGGAGGAGC AGGGCGAGGT CAAGGAAGGG
CGCTTCCCGA CCCAGGCCGA GGCCGACTAC CAACACCGCC GCGCCCTGCA ACGACTGCTG
TTGCAGCAAC TGGCCGAGCC GGCCAAGTAC CTGCGCGCCA AGCTGCCGGG GCAGACCGAG
ATGGGTCTGC TGTACCGCGA GCTGGGACGG GTCGAGGCGC TGGTCGAGGA CATCCTCCTG
GCCAGTCTCG ACAGTTGCGT GCTGCAGGGC GAAGGCCTGC CGCGCGACGG CGCCGCCCTG
GCCGCGCTGG CCGAGCGCAA GCGCGCTGCC TGGAACGAGC ACGCCGAGCG CCTGGCACGC
CTGGTGCTGG ATATCCTCAA GCTCTGGCAC GGCCTGCAGA AGCGCTTCAA GGGCAAGGTC
GAGCTGGCCA TGACCGTGCC GCTGAACGAC GTCAAGGGCC AACTGGCCAA CCTGGTGTAT
CCGGGGTTCG TCCGCGCCAC CCCGCTGGAG TGGTTGAAGG AGTATCCGCG TTACCTCAAG
GCCATCGAGC AGCGCCTGGA CAAGGTCGCC GGCCAGGTCC AGCGCGACCG GGTGTGGAGC
GGCGAGCTGG GCGAACTCTG GGCGCAATAC CAGGCGCGCC TCGCCAAGCA CGCCCAGGAA
GGCAAGCGCG ACGCCGAGTT GCAGGTGTAT CGCTGGATGC TGGAGGAGTA CCGGGTCTCG
TTGTTCGCCC AGCAACTGGG GACCCGGCTG CCGGTCTCGG ACAAGCGCCT GGCCAAGCAG
TGGAGCCAGG TCGAGGGCTA G
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| Protein sequence | MTDQTPSLDQ LVRRLDQAQI SDRHRLRRQL HELRKQPDDA RLAQWVERFQ ASCAKVEARR
ASVPAIRYDD SLPIAAKRDE IKAAIAAHQV VVIAGETGSG KTTQLPKICL ELGRGIHGLI
GHTQPRRLAA RSVATRVAEE IGTPLGALVG YQVRFEDQSD DSTLVKLMTD GILLAETQHD
RYLERYDTLI VDEAHERSLN IDFLLGYLKT LLHRRPDLKL IITSATIDLE RFSRHFDGAP
VIEVSGRTYP VETWYRPLAA ETDEEGNRVE DDLSVDQGIL AALDEIAAHE REVGKRPGDV
LVFLPGEREI RDAAEMLRKA NLRHTEVLPL YARLTPAEQQ KIFQPRPGRK IVLSTNVAET
SLTVPGIRYV IDSGTARISR YSYRAKVQRL PIEAVSQASA NQRKGRCGRV EPGICVRLYS
EEDFNARPAF TDPEILRTNL AAVILQMLHL RLGDIEAFPF IEPPDGKAIK DGFTLLQELS
AVNREGQLTP LGRQLARLPI DPRLGRMLLE AAQQGSLEEV LTVASALSVQ DPRERPVERQ
QAADQAHAQW KDPDSDFAAL INLWRGFEEQ RQALGSNALR SWCRKNFLNY LRLREWRDAH
RQLTLICREL KLPFGRPAKA EARKPEAKKG ASADNEREVP GIDYAAVHKA ILSGLLSQIG
QKAEEGDYLG ARQRRFWIHP SSGIARKRPQ WIMAAELVET TKLFARMVAK IEPDWLEPLA
GHLIKTNHFE PHWEKRRGQV VAFEQVTLYG LIVIGRRPVH YGPIDPPVAR ELFIREGLVR
GEINSRARCL SANRQLLEKL DELEAKARRR DILADEETLF AYYDARLPAD IYQTASFEKW
YARERQNQPD LLLMREEDVL AREASEVTAA QYPDRLRLGD LHLSLSYQFE PGTARDGVTV
RVPAPLLPQL PAERIDWLVP GLLYDKAVAL VRNLPKAIRK SFVPVPDFVR AALERITFGE
GSLPQALGRE LQRMTGVRVA DEAWAEAATQ LDDHLRMNIE VVDAQGKFLG EGRDLAELTA
RFAEASQAAL AIPQADKEQQ RPVEAKAFAS VAEKAQQKVA GLSMTVYPAL VEEQGEVKEG
RFPTQAEADY QHRRALQRLL LQQLAEPAKY LRAKLPGQTE MGLLYRELGR VEALVEDILL
ASLDSCVLQG EGLPRDGAAL AALAERKRAA WNEHAERLAR LVLDILKLWH GLQKRFKGKV
ELAMTVPLND VKGQLANLVY PGFVRATPLE WLKEYPRYLK AIEQRLDKVA GQVQRDRVWS
GELGELWAQY QARLAKHAQE GKRDAELQVY RWMLEEYRVS LFAQQLGTRL PVSDKRLAKQ
WSQVEG
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