| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21340 |
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| Symbol | fadD2 |
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| ID | 4381319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1848101 |
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| End bp | 1849789 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639324266 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_789853 |
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| Protein GI | 116051315 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.556582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTG AATTCTGGAA CGACAAACGC CCGGCCGGCG TACCCGACAG TCTCGACTTC
GCCGCCTACC GTTCCGTGGT CGAGGTCTTC GAGCGCTCCT GCAAGAAATT CGCCGACCGC
CCGGCCTTCA GCAATCTCGG CGTGACGCTC AGCTACGCCG AACTCGATCG TCTGTCCGCC
GCCTTCGCCG CCTACCTGCA GAAACAGACC GATCTCCAGC CCGGCGACCG CATCGCGGTG
CAGATGCCCA ATGTCCTGCA ATATCCCATC GCGGTGTTCG GCGCCTTGCG CGCGGGGCTG
GTGGTGGTCA ACACCAATCC GCTGTACACC GCCCGCGAAA TGCGCCACCA GTTCAAGGAC
GCCGGCGTGC GTGCGCTGGT CTACCTGAAC GTGTTCGGCA AGCTGGTCGA GGAAGTGCTC
CCGGATACGC GGATCGAGTA CCTGATCGAG GCGCGCATGG GCGACCTGTT GCCGGCGCTG
AAGGGTTGGC TGGTGAACAG CGTGGTGAAG TCGGTGAAGA AGATGGTCCC CGATTATCGC
TTGCCCCAGG CGCTGCCGTT CAGGCAGGCC TTGAAGCAAG GCCAGGGCCA TGCCCTGCAG
CCGGTCAGGG TCGGCCTGGA GGATGTCGCC GTGTTGCAGT ACACCGGCGG CACCACCGGG
GTCTCGAAGG GGGCGATGCT CACCCACGGC AACCTGGTGG CGAACATGCT GCAGGTCCAC
GCCCAGCTTT CCCAGCTCGG CAAGGATGGC CTGCCGCTGA TGAAGGAGGC GCAGGAGGTG
ATGATCGCGC CGCTGCCGCT CTACCACATC TATGCCTTCA CCGCGAACTG CATGTGCATG
ATGGTCAGCG GCAACCATAA CGTGCTGATC ACCAACCCGC GCGACATCCC CGGTTTCGTC
AAGGAACTGA AGAAGTGGCG TTTCTCCGCG CTGCTCGGCC TCAACACCCT GTTCGTCGCG
CTGATGGAGC ATCCCGGGTT CAAGGACGTC GATTTCTCCA ACCTGAAGCT CACCAACTCC
GGCGGCACTG CACTGGTCAG CGCCACCGCC GAGCGCTGGA AGGGTGTCAC CGGCTGCACC
GTGGTGGAAG GCTATGGCCT CACCGAATGC TCGCCGGTGG TGACCACCAA CCCCTACGGC
GAGCAGGCGC GCCTGGGCAC GGTGGGGATT CCGGTCGTGG GCACGGCGCT CAAGGTGATC
GACGAGCAGG GCAACGAGCT GCCTGTCGGC GAACGTGGCG AACTCTGTGT GAAAGGTCCG
CAAGTGATGA AGGGGTACTG GCAGCGTCCC GAGGCCACCG AGGAGATTCT CGATGCCGAA
GGCTGGCTGA AGACCGGCGA CATCGCGGTG ATCGACGAGG ACGGCTTCGT GCGTATCGTC
GATCGCAAGA AGGACCTGAT CCTGGTCTCT GGCTTCAATG TCTACCCCAA CGAGATCGAA
GACGTGGTGA TGGCCCATCC GAAGGTGGCC AGTTGCGCGG CGGTGGGCAT TCCCGACGAG
AAGTCCGGCG AGGCGGTGAA GCTGTTCGTG GTGGCCCGCG ACCCCAGCCT GTCGGTCGAG
GAGCTCAAGG CCTACTGCAA GGAAAACCTC ACCGGATACA AAATTCCGCG ACAGATTGTG
CTCAAGGATG CATTACCGAT GACGCCTGTG GGTAAAATCC TCCGTCGTGA GCTGCGCGAA
ATCGCCTGA
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| Protein sequence | MQPEFWNDKR PAGVPDSLDF AAYRSVVEVF ERSCKKFADR PAFSNLGVTL SYAELDRLSA
AFAAYLQKQT DLQPGDRIAV QMPNVLQYPI AVFGALRAGL VVVNTNPLYT AREMRHQFKD
AGVRALVYLN VFGKLVEEVL PDTRIEYLIE ARMGDLLPAL KGWLVNSVVK SVKKMVPDYR
LPQALPFRQA LKQGQGHALQ PVRVGLEDVA VLQYTGGTTG VSKGAMLTHG NLVANMLQVH
AQLSQLGKDG LPLMKEAQEV MIAPLPLYHI YAFTANCMCM MVSGNHNVLI TNPRDIPGFV
KELKKWRFSA LLGLNTLFVA LMEHPGFKDV DFSNLKLTNS GGTALVSATA ERWKGVTGCT
VVEGYGLTEC SPVVTTNPYG EQARLGTVGI PVVGTALKVI DEQGNELPVG ERGELCVKGP
QVMKGYWQRP EATEEILDAE GWLKTGDIAV IDEDGFVRIV DRKKDLILVS GFNVYPNEIE
DVVMAHPKVA SCAAVGIPDE KSGEAVKLFV VARDPSLSVE ELKAYCKENL TGYKIPRQIV
LKDALPMTPV GKILRRELRE IA
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