Gene PA14_21300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_21300 
Symbol 
ID4381322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1845111 
End bp1846286 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID639324263 
Productputative MFS transporte 
Protein accessionYP_789850 
Protein GI116051318 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTC GCTTGCTGTT GCTATCCCTG ACCACCTTCG CCGCCGGCCT GGCGGAAAGC 
ATCCTGATCG GCATCCTGCC GCCCCTGGCC GAAGACCTGC GGGTCTCCAT CAGCCTGGCC
GGCCAGCTCA CTACCCTGTT CTCCCTCGGC TTCGCCCTCG CCGCACCGCT GCTCGGCTGG
CTGACCCGGC GCATCGAACG CCGCCGCCTG CTGCTGGCGA CCCTGCTGCT GTTCGCCCTC
AGCAACGCGC TCGCCGCCCT CGCTCCGGGC TATCTCGGCC TGCTCCTGGC TCGCCTGGGC
ATGTCGGCCT GTTGCGGGCT GCTGATCGTC CTCGCCAGCC TGCTCGCCGC CGAGCTGGCC
GCCCCGGCCC AGCGCGGCCG GGCGATCGGC CTGATCTTCA TGGGCATCAG CGGTTCGCTG
GTGTTCGGCG TGCCACTGGG CGTACAGATC AGCGACTGGT TCGGCTGGCG CTGGATCTTC
GCCGGCATCG CGGTCTATTC GCTGCCCTTG TGCCTGCTGC TCTGGCGCTA CCTGCCGCAA
CGCCAGGCCG GCGACCTGCC CGGCCGCGAA GGCTATCTGC GGCAGTTGCG CCAGCCCGCG
CTGTGGCTCG CGCAACTGGT ATCGATCCTG TTGCTCGGCG GGCACTTCAC CCTGTTCGCC
TATTTCACCC CGTACCTGGC GAGCATGGCC GGTATTCGCT CGCCCGGCGA GATCAGCCTG
ATCCTCCTGC TGATCGGCCT GGCAGCGCTG AGCGGCGGCT ATATCGGCGG CTGGCTGGCC
GACCGCCTCG GCCACCGGCG CGCCCTGCGT CTGGTGCCGG CGGCCTTCGC CCTGGCGCTG
GCGGCGGTGC CGCTGAGCCT GGGCAGCATT GGGTTCCTGC CGGTACTGAT GGTCTGGAGC
GCGATCAGTT GGATGATCTC GCCGGTGGTG CAGAGCTTCC TGCTGCGCAG CGATCCGGCC
AGCGGTTCCG CCGGCGTCGC CCTGAACACC TCGGCCATGC ACCTGGGCGT GGGCCTCGGC
GCGGCGCTGG GCGGCCTGGT GGTGGCGGCA CTGGGAGTCG CCGCGACGCC CTGGGTCGGC
CTCGCCCTGG TGCTGGCGGC ACTGGCCTGC GCGCTTGGCG CCAGCACGCT GGATGGCGCC
ACGCAAGCGC TGCCGCTCAG TCCCCCTGCA CGGTGA
 
Protein sequence
MDLRLLLLSL TTFAAGLAES ILIGILPPLA EDLRVSISLA GQLTTLFSLG FALAAPLLGW 
LTRRIERRRL LLATLLLFAL SNALAALAPG YLGLLLARLG MSACCGLLIV LASLLAAELA
APAQRGRAIG LIFMGISGSL VFGVPLGVQI SDWFGWRWIF AGIAVYSLPL CLLLWRYLPQ
RQAGDLPGRE GYLRQLRQPA LWLAQLVSIL LLGGHFTLFA YFTPYLASMA GIRSPGEISL
ILLLIGLAAL SGGYIGGWLA DRLGHRRALR LVPAAFALAL AAVPLSLGSI GFLPVLMVWS
AISWMISPVV QSFLLRSDPA SGSAGVALNT SAMHLGVGLG AALGGLVVAA LGVAATPWVG
LALVLAALAC ALGASTLDGA TQALPLSPPA R