Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21300 |
Symbol | |
ID | 4381322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1845111 |
End bp | 1846286 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639324263 |
Product | putative MFS transporte |
Protein accession | YP_789850 |
Protein GI | 116051318 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTC GCTTGCTGTT GCTATCCCTG ACCACCTTCG CCGCCGGCCT GGCGGAAAGC ATCCTGATCG GCATCCTGCC GCCCCTGGCC GAAGACCTGC GGGTCTCCAT CAGCCTGGCC GGCCAGCTCA CTACCCTGTT CTCCCTCGGC TTCGCCCTCG CCGCACCGCT GCTCGGCTGG CTGACCCGGC GCATCGAACG CCGCCGCCTG CTGCTGGCGA CCCTGCTGCT GTTCGCCCTC AGCAACGCGC TCGCCGCCCT CGCTCCGGGC TATCTCGGCC TGCTCCTGGC TCGCCTGGGC ATGTCGGCCT GTTGCGGGCT GCTGATCGTC CTCGCCAGCC TGCTCGCCGC CGAGCTGGCC GCCCCGGCCC AGCGCGGCCG GGCGATCGGC CTGATCTTCA TGGGCATCAG CGGTTCGCTG GTGTTCGGCG TGCCACTGGG CGTACAGATC AGCGACTGGT TCGGCTGGCG CTGGATCTTC GCCGGCATCG CGGTCTATTC GCTGCCCTTG TGCCTGCTGC TCTGGCGCTA CCTGCCGCAA CGCCAGGCCG GCGACCTGCC CGGCCGCGAA GGCTATCTGC GGCAGTTGCG CCAGCCCGCG CTGTGGCTCG CGCAACTGGT ATCGATCCTG TTGCTCGGCG GGCACTTCAC CCTGTTCGCC TATTTCACCC CGTACCTGGC GAGCATGGCC GGTATTCGCT CGCCCGGCGA GATCAGCCTG ATCCTCCTGC TGATCGGCCT GGCAGCGCTG AGCGGCGGCT ATATCGGCGG CTGGCTGGCC GACCGCCTCG GCCACCGGCG CGCCCTGCGT CTGGTGCCGG CGGCCTTCGC CCTGGCGCTG GCGGCGGTGC CGCTGAGCCT GGGCAGCATT GGGTTCCTGC CGGTACTGAT GGTCTGGAGC GCGATCAGTT GGATGATCTC GCCGGTGGTG CAGAGCTTCC TGCTGCGCAG CGATCCGGCC AGCGGTTCCG CCGGCGTCGC CCTGAACACC TCGGCCATGC ACCTGGGCGT GGGCCTCGGC GCGGCGCTGG GCGGCCTGGT GGTGGCGGCA CTGGGAGTCG CCGCGACGCC CTGGGTCGGC CTCGCCCTGG TGCTGGCGGC ACTGGCCTGC GCGCTTGGCG CCAGCACGCT GGATGGCGCC ACGCAAGCGC TGCCGCTCAG TCCCCCTGCA CGGTGA
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Protein sequence | MDLRLLLLSL TTFAAGLAES ILIGILPPLA EDLRVSISLA GQLTTLFSLG FALAAPLLGW LTRRIERRRL LLATLLLFAL SNALAALAPG YLGLLLARLG MSACCGLLIV LASLLAAELA APAQRGRAIG LIFMGISGSL VFGVPLGVQI SDWFGWRWIF AGIAVYSLPL CLLLWRYLPQ RQAGDLPGRE GYLRQLRQPA LWLAQLVSIL LLGGHFTLFA YFTPYLASMA GIRSPGEISL ILLLIGLAAL SGGYIGGWLA DRLGHRRALR LVPAAFALAL AAVPLSLGSI GFLPVLMVWS AISWMISPVV QSFLLRSDPA SGSAGVALNT SAMHLGVGLG AALGGLVVAA LGVAATPWVG LALVLAALAC ALGASTLDGA TQALPLSPPA R
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