Gene PA14_21290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_21290 
Symbol 
ID4381323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1844273 
End bp1845130 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID639324262 
Producthypothetical protein 
Protein accessionYP_789849 
Protein GI116051319 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAT CGCTTCGCGT CGTCGTCACC CTGCTGGTGG TCGCTGCCGC CGTCCTCGCC 
GGCATCTGGC TCTGGCGCTA CTACATGCTC TCGCCCTGGA CCCGCGATGC CCGGGTGCGG
GCCGACGTGG TGGTGGTGGC GCCGGACGTG TCCGGCTGGG TGACCGACCT GGAAGTCAAG
GACAACCAGG TGGTCAAGGT CGGCGACGTG CTGATGCGCA TCGACCAGGA ACGCTACCAG
GCCAACCTGG AGCAGGCCCG CGCCGTCGCC GAGACCCGTC ACCAGCAATA CCTGTTGCGC
CAGAACGAGG CGGCCCGGCG CAGCCGCCTG GGCATCGGCG CGATCAGCGC CGAGGACAAG
GAAAACGCCC AGATCAATGC CGCCATCGCT CGCAGCGAGT ACCAGGAAGC ACTGGCCCAG
GTGAAGATCG CCGAACTCAA CCTCAAGCGC AGCGAACTGC GCGCTGCGCG CAACGGACAG
GTGACCAACC TGCGCCTGGC CCAGGGCAAC TACGCCACGG CGGGCCAGGC GGTGATGGCG
CTGGTCGACC AGCAGTCCTT CTATGTGGTC GCCTACTTCG AGGAAACCAA GCTGCCCGGC
ATCCGCGTCG GCATGCGCGC CCAGGTCCGC CTGATGAGCG GCGATCAGCC GATCGACGGC
ACGGTGGAGA GCATCAGCAG CGGTATCACC GACCGCAACT CGACGCCGGA CGGCCAGTTG
CTGGCCAATG TCGAGCCGAC CTTCAACTGG GTGCGCCTGG CGCAGCGCAT TCCGGTGCGC
ATCCGCCTCG ACCAGGTGCC GGCGGATGTC CACCTGAGCG CCGGGATGAC CGCCAGCGTC
ACCGTGCAGG GGGACTGA
 
Protein sequence
MRASLRVVVT LLVVAAAVLA GIWLWRYYML SPWTRDARVR ADVVVVAPDV SGWVTDLEVK 
DNQVVKVGDV LMRIDQERYQ ANLEQARAVA ETRHQQYLLR QNEAARRSRL GIGAISAEDK
ENAQINAAIA RSEYQEALAQ VKIAELNLKR SELRAARNGQ VTNLRLAQGN YATAGQAVMA
LVDQQSFYVV AYFEETKLPG IRVGMRAQVR LMSGDQPIDG TVESISSGIT DRNSTPDGQL
LANVEPTFNW VRLAQRIPVR IRLDQVPADV HLSAGMTASV TVQGD