Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21180 |
Symbol | |
ID | 4385425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1831413 |
End bp | 1832303 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639324253 |
Product | putative 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_789840 |
Protein GI | 116051328 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.542348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTT CCCTGCCTTC CCTTGCCTTC GCCGGTCTCG GCCTGATGGG CGTGCCCATG TGCCGCCGGC TGCTGGCCGC CGGCTATCCG CTGGCGGTGT GGAACCGTTC GCCGGGCAAA CGCGAGTTGC TCGCGGCCGA GGGCGCGAAA GCCGTGGAGG TCCCGGCCGA ACTGGCCGCC GACGCGGAAA TCCTGATGCT TTGCCTGGCC GATACCGCGG CGGTGCGCGA AGTGGTGTTC GGCGCCGGCG GCATCGTCGA GAACGCCAGG CCCGGGCAGT TGCTGGTGGA TTTCTCCAGC GCCGAGCCGG CCGCCACCCG CGAGATGGCC GCCGAGCTGG AGGCGCGCTG CGGCGTGCGC TGGGTCGACG CGCCGGTCTC CGGCGGCACG CCGGGCGCGG AAAGCGGCAG CCTGGCGATC ATGGCCGGCG GACGCGCAGC GGATATCGAG CGCCTGCGGC CGGTCCTCTC CCGGCTCGGC CAGCGCCTGA CGCGCATGGG CGAGGTGGGC GCCGGGCAGG TGACCAAGGT CTGCAACCAG ATGATCGTTG CCTGCAACGC CCTGGTGATC GCCGAAGTGG TGGCGCTGGC GGAGCGGGCC GGGGTCGACG CCAGCCTGGT CGCTCCGGCG CTGGCGGGCG GCTTCGCCGA CTCGAAGCCG TTGCAGATCC TCGCCCCGCA AATGGCCGAG AGCCGTTACG AGCCGGTCAA GTGGCACGTA CGGACCCTGC TCAAGGATCT CGATACCGCG GTGAAGCTGT CCCGCGAGCA AGGCGCGGCC ACCCCGATGA GCGGGTTGGC CGCGCAGTTG ATGCGTCTGC ACGGCAGCCA GGGCTATCTC GAACGCGATC CGGCGACCCT GGTGGAGCAA TACCGGACCG CCGTCGAGTG A
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Protein sequence | MSASLPSLAF AGLGLMGVPM CRRLLAAGYP LAVWNRSPGK RELLAAEGAK AVEVPAELAA DAEILMLCLA DTAAVREVVF GAGGIVENAR PGQLLVDFSS AEPAATREMA AELEARCGVR WVDAPVSGGT PGAESGSLAI MAGGRAADIE RLRPVLSRLG QRLTRMGEVG AGQVTKVCNQ MIVACNALVI AEVVALAERA GVDASLVAPA LAGGFADSKP LQILAPQMAE SRYEPVKWHV RTLLKDLDTA VKLSREQGAA TPMSGLAAQL MRLHGSQGYL ERDPATLVEQ YRTAVE
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