Gene PA14_21180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_21180 
Symbol 
ID4385425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1831413 
End bp1832303 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content71% 
IMG OID639324253 
Productputative 3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_789840 
Protein GI116051328 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.542348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTT CCCTGCCTTC CCTTGCCTTC GCCGGTCTCG GCCTGATGGG CGTGCCCATG 
TGCCGCCGGC TGCTGGCCGC CGGCTATCCG CTGGCGGTGT GGAACCGTTC GCCGGGCAAA
CGCGAGTTGC TCGCGGCCGA GGGCGCGAAA GCCGTGGAGG TCCCGGCCGA ACTGGCCGCC
GACGCGGAAA TCCTGATGCT TTGCCTGGCC GATACCGCGG CGGTGCGCGA AGTGGTGTTC
GGCGCCGGCG GCATCGTCGA GAACGCCAGG CCCGGGCAGT TGCTGGTGGA TTTCTCCAGC
GCCGAGCCGG CCGCCACCCG CGAGATGGCC GCCGAGCTGG AGGCGCGCTG CGGCGTGCGC
TGGGTCGACG CGCCGGTCTC CGGCGGCACG CCGGGCGCGG AAAGCGGCAG CCTGGCGATC
ATGGCCGGCG GACGCGCAGC GGATATCGAG CGCCTGCGGC CGGTCCTCTC CCGGCTCGGC
CAGCGCCTGA CGCGCATGGG CGAGGTGGGC GCCGGGCAGG TGACCAAGGT CTGCAACCAG
ATGATCGTTG CCTGCAACGC CCTGGTGATC GCCGAAGTGG TGGCGCTGGC GGAGCGGGCC
GGGGTCGACG CCAGCCTGGT CGCTCCGGCG CTGGCGGGCG GCTTCGCCGA CTCGAAGCCG
TTGCAGATCC TCGCCCCGCA AATGGCCGAG AGCCGTTACG AGCCGGTCAA GTGGCACGTA
CGGACCCTGC TCAAGGATCT CGATACCGCG GTGAAGCTGT CCCGCGAGCA AGGCGCGGCC
ACCCCGATGA GCGGGTTGGC CGCGCAGTTG ATGCGTCTGC ACGGCAGCCA GGGCTATCTC
GAACGCGATC CGGCGACCCT GGTGGAGCAA TACCGGACCG CCGTCGAGTG A
 
Protein sequence
MSASLPSLAF AGLGLMGVPM CRRLLAAGYP LAVWNRSPGK RELLAAEGAK AVEVPAELAA 
DAEILMLCLA DTAAVREVVF GAGGIVENAR PGQLLVDFSS AEPAATREMA AELEARCGVR
WVDAPVSGGT PGAESGSLAI MAGGRAADIE RLRPVLSRLG QRLTRMGEVG AGQVTKVCNQ
MIVACNALVI AEVVALAERA GVDASLVAPA LAGGFADSKP LQILAPQMAE SRYEPVKWHV
RTLLKDLDTA VKLSREQGAA TPMSGLAAQL MRLHGSQGYL ERDPATLVEQ YRTAVE