| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21140 |
|---|
| Symbol | |
|---|
| ID | 4385428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1828013 |
|---|
| End bp | 1828783 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639324249 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_789836 |
|---|
| Protein GI | 116051331 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0807284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGA CCTGGCGCCT GCTGCTCTGG CCGCTGCTGG TGGTGGCCGC GGTGGGCGCC
TCGTTCGCCT ACCTGGACAT GGCCACCGCA GGTCTTTTCA GCGGCAAGGG ACTGGGCCAG
ATGGCCGCCT ACGCCAGCGA GTTCTTCCCG CCCGACCTGT CCGCCCCGCA CCTGCGGGCG
ATTGGCCGGG GGCTGCTGGA AACCCTGGCC ATGTCGGCCA TCGGCACCCT GCTGGCGGCG
CTGCTCGGCC TGCTCTTCGC GCTGCCGGCG GCGGGTCGCT TCGGCGTGCC GGCGCAGAGC
CTGGCGCGAC TCCTGCTCAA TGCGCTGCGC GCCGTGCCGG AGCTGGTCTG GGGTGCGCTG
ATGGTGCTGG CGGCCGGGCT CGGGCCGAAC GCCGGGACCC TCGCCCTGGC GCTGCACACC
GGCGGCGTGC TCGGCCGGCT GTTCGCCGAA GCCCTGGAGA ACACCCCGGC GCAGCCCGCC
GAGGCCTTGC GCCTGGCCGG CAGCGGACGC CTCGCGGCAT TCGCCTATGG CACCCTGCCG
GGGGTCTGGC CGCAACTGGT GGCCTATACC CTGTACCGCT GGGAGAACAA TATCCGCATG
GCCAGCGTGC TCGGCTTCGT CGGTGCCGGC GGGCTCGGGC AGATGCTCTA TTTCAGCCTC
AGCCTGTTCC AGCAGGCCCA GGCCGCCACG GTGATCCTGG CCATGCTGAT CCTGGTGCTC
GGGGTCGACA GCCTGAGCGC CTGGGCCCGG CAGCGCTGGG TCAGTCAATA A
|
|---|
| Protein sequence | MSRTWRLLLW PLLVVAAVGA SFAYLDMATA GLFSGKGLGQ MAAYASEFFP PDLSAPHLRA
IGRGLLETLA MSAIGTLLAA LLGLLFALPA AGRFGVPAQS LARLLLNALR AVPELVWGAL
MVLAAGLGPN AGTLALALHT GGVLGRLFAE ALENTPAQPA EALRLAGSGR LAAFAYGTLP
GVWPQLVAYT LYRWENNIRM ASVLGFVGAG GLGQMLYFSL SLFQQAQAAT VILAMLILVL
GVDSLSAWAR QRWVSQ
|
|---|
| |