Gene PA14_20980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20980 
Symbol 
ID4384589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1806213 
End bp1807127 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID639324235 
Productputative short chain dehydrogenas 
Protein accessionYP_789822 
Protein GI116051345 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.696574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTCA CCAGCAAACC TCTCTCGCCC CAGGGCCGCC ACGTACTGAT CACCGGCGCC 
TCCAGCGGCC TCGGCCGGGA AACCGCGCTG CACCTGGCCG AACAGGGTTT CCAGGTGATC
GCCGGGGTGC GCCGCCAGGA GGATGGCGAG CGCCTGGCGA ACGCCTGCCC GTCCGGCCGG
ATCAGCACGC TGCTGATCGA TGTCACCGAC GAGGAATCCA TTGGCCGGGC CGCCGCGCAG
GTGGCGGAGA AAGTCGGCGA TACCGGGCTC TGGGGCCTGG TGAACAACGC CGGGATCTGC
ATTTCCGCGC CGCTGGAATG CGTCTCCAGC GACCTGCTGC GGCGCCAGCT GGAAGTCAAC
CTGATCGGCC AGCTCGCGGT GACCCGGGCG ATCCTGCCGC TGCTGCGCCG TGGCGGCGCG
GCGCGCCTGG TGAACGTCAC CTCGGGCCTC GGCTCGGTCG CCATTCCCTA CCTGGGCGCC
TACTCCGCCG CGCAGTTCGC CAAGGAGGGA GTGAGCGACG CCCTGCGCCG CGAGCTGGCG
CCCATGGGCA TCCAGGTCTC GGTGGTCAGC CCCGGGGCGA TCTGGACGCC GATCTGGGGC
AAGATCGCCA GCGAGGGCGA GCGCGCCCTG GCCGACGCCC CCGACGCCGT CGCCGACCTC
TATCGCGATA CCTACCTGCG CTTCCTCCAG GCCAACGAGG ACGGCGCGCG CAACAGCGCG
ACCAAGCCCG CCGACGTCGC CGCCGCGGTG CATGCCGCGC TCACCGCGGC CAAGCCGCGG
ACCCGCTACC GGGTCGGCGC CGACGTGCGC CGCGGCACCC TGCTGGCGCG GCTGCTGCCC
GATAGCGTGA TCGACGGGAT GTTCCGCCCC ATCGTCACCG CCGCCCCGGC GGCGAAGGAG
GAGCAACGTG CCTGA
 
Protein sequence
MLFTSKPLSP QGRHVLITGA SSGLGRETAL HLAEQGFQVI AGVRRQEDGE RLANACPSGR 
ISTLLIDVTD EESIGRAAAQ VAEKVGDTGL WGLVNNAGIC ISAPLECVSS DLLRRQLEVN
LIGQLAVTRA ILPLLRRGGA ARLVNVTSGL GSVAIPYLGA YSAAQFAKEG VSDALRRELA
PMGIQVSVVS PGAIWTPIWG KIASEGERAL ADAPDAVADL YRDTYLRFLQ ANEDGARNSA
TKPADVAAAV HAALTAAKPR TRYRVGADVR RGTLLARLLP DSVIDGMFRP IVTAAPAAKE
EQRA