Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20980 |
Symbol | |
ID | 4384589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1806213 |
End bp | 1807127 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639324235 |
Product | putative short chain dehydrogenas |
Protein accession | YP_789822 |
Protein GI | 116051345 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.696574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTCA CCAGCAAACC TCTCTCGCCC CAGGGCCGCC ACGTACTGAT CACCGGCGCC TCCAGCGGCC TCGGCCGGGA AACCGCGCTG CACCTGGCCG AACAGGGTTT CCAGGTGATC GCCGGGGTGC GCCGCCAGGA GGATGGCGAG CGCCTGGCGA ACGCCTGCCC GTCCGGCCGG ATCAGCACGC TGCTGATCGA TGTCACCGAC GAGGAATCCA TTGGCCGGGC CGCCGCGCAG GTGGCGGAGA AAGTCGGCGA TACCGGGCTC TGGGGCCTGG TGAACAACGC CGGGATCTGC ATTTCCGCGC CGCTGGAATG CGTCTCCAGC GACCTGCTGC GGCGCCAGCT GGAAGTCAAC CTGATCGGCC AGCTCGCGGT GACCCGGGCG ATCCTGCCGC TGCTGCGCCG TGGCGGCGCG GCGCGCCTGG TGAACGTCAC CTCGGGCCTC GGCTCGGTCG CCATTCCCTA CCTGGGCGCC TACTCCGCCG CGCAGTTCGC CAAGGAGGGA GTGAGCGACG CCCTGCGCCG CGAGCTGGCG CCCATGGGCA TCCAGGTCTC GGTGGTCAGC CCCGGGGCGA TCTGGACGCC GATCTGGGGC AAGATCGCCA GCGAGGGCGA GCGCGCCCTG GCCGACGCCC CCGACGCCGT CGCCGACCTC TATCGCGATA CCTACCTGCG CTTCCTCCAG GCCAACGAGG ACGGCGCGCG CAACAGCGCG ACCAAGCCCG CCGACGTCGC CGCCGCGGTG CATGCCGCGC TCACCGCGGC CAAGCCGCGG ACCCGCTACC GGGTCGGCGC CGACGTGCGC CGCGGCACCC TGCTGGCGCG GCTGCTGCCC GATAGCGTGA TCGACGGGAT GTTCCGCCCC ATCGTCACCG CCGCCCCGGC GGCGAAGGAG GAGCAACGTG CCTGA
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Protein sequence | MLFTSKPLSP QGRHVLITGA SSGLGRETAL HLAEQGFQVI AGVRRQEDGE RLANACPSGR ISTLLIDVTD EESIGRAAAQ VAEKVGDTGL WGLVNNAGIC ISAPLECVSS DLLRRQLEVN LIGQLAVTRA ILPLLRRGGA ARLVNVTSGL GSVAIPYLGA YSAAQFAKEG VSDALRRELA PMGIQVSVVS PGAIWTPIWG KIASEGERAL ADAPDAVADL YRDTYLRFLQ ANEDGARNSA TKPADVAAAV HAALTAAKPR TRYRVGADVR RGTLLARLLP DSVIDGMFRP IVTAAPAAKE EQRA
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