Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20900 |
Symbol | |
ID | 4384595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1801165 |
End bp | 1802331 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639324229 |
Product | putative MFS transporter |
Protein accession | YP_789816 |
Protein GI | 116051351 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTGA TTGTCTACGT GCTCGGTGCC GCGATCTTCG CCCTGACCAC CAGCGAATAC ATGGTCGCCG GGCTGATGCC GGCGCTGGCC GCCGAATTCG GCGTGTCCTT CGCCGCGATC GGCTACCTGG TCACCTTCTA CGCCGGCGCG ATGGCGCTCG GCGGCCCGCT GCTGACCACC GCCCTGCTCC GCGTGCCGCG CAAGAACGCC CTGCTCGGCC TGATCGCGCT GTTCGTGGTC GGCCAGGTCA TCGGCGCCCT GGCGCCGGGC TATGCGGTGA TGGTCGCGGC GCGACTGGTC ACCGCGGTCG CCGCCGCGGC CTTCTTCGGC GTGGCGCTGA CCGCCTGCGC CGAACTGGTC GAAGGCAACC AGTTCGGCCG CGCGTCGTCG CTGGTGCTCG GTGGCCTGAT GGTCGGAACC GTGCTTGGCC TGCCCGTCGC CACCTGGCTG GGCGAATGGT ACGGCTGGCG CGCGAGCTTC TTCGCGGTGG CGCTGGTGGC GGTGCTGGTC GGCCTGCTGG TGTTGCAGCT GATGCCGGCG ATCCCGGGGT CGGCGGGCAG CGGCTCGCTG CGCGAGGAAC TGAAGGTGTT CAGGAACGCC CATCTATGGT GGGTCTACGC CACCAGCCTA CTGCTGATCG GCGCCACCTT CGCCGGCTTC ACCTATTTCG TGCCGATCCT CACCGAGGTC AGCGGCTTCT CCGCCTCGAC CGTACCGCTG CTGCTGGTGG TCTACGGCCT GGCGACGCTG GTGGGCAACA ACATCGTCGG CCGCCTGGCC GACCGCCATA CCATCGCGGT CCTGGCCTTC GGCCTGCTGG CGGCCATCGC CGCGATGGTG GCCTTCGCCC TGTTCGGACA GGTTCCGGCG GTAGCGGTGG CGGCGCTGGT GGTGATCGGC CTGACCGGGG TGTCGATGAA CCCAGCGCTG GTGACCCGCG GCGCACGTGT CGGCCATAAC AACATGCTGG TCAACTCGGT GCACACTGCC TGCATCATGC TCGGCGTGAT GGCCGGTTCC TGGATCGGCG GCCTGGGCAT CGCCGGCGGA TTCGGCCTGC AGGGCGCGCT CTGGGTCGGC GCGGCCCTCG GGGTGCTGGC GCTGCTGACC CTGCTGCCGG AGCTGCGCTT CGCCCGCGCC CCGGTGGGCG GGGCGCTGGG CCGCTGA
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Protein sequence | MPLIVYVLGA AIFALTTSEY MVAGLMPALA AEFGVSFAAI GYLVTFYAGA MALGGPLLTT ALLRVPRKNA LLGLIALFVV GQVIGALAPG YAVMVAARLV TAVAAAAFFG VALTACAELV EGNQFGRASS LVLGGLMVGT VLGLPVATWL GEWYGWRASF FAVALVAVLV GLLVLQLMPA IPGSAGSGSL REELKVFRNA HLWWVYATSL LLIGATFAGF TYFVPILTEV SGFSASTVPL LLVVYGLATL VGNNIVGRLA DRHTIAVLAF GLLAAIAAMV AFALFGQVPA VAVAALVVIG LTGVSMNPAL VTRGARVGHN NMLVNSVHTA CIMLGVMAGS WIGGLGIAGG FGLQGALWVG AALGVLALLT LLPELRFARA PVGGALGR
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