Gene PA14_20900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20900 
Symbol 
ID4384595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1801165 
End bp1802331 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID639324229 
Productputative MFS transporter 
Protein accessionYP_789816 
Protein GI116051351 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGA TTGTCTACGT GCTCGGTGCC GCGATCTTCG CCCTGACCAC CAGCGAATAC 
ATGGTCGCCG GGCTGATGCC GGCGCTGGCC GCCGAATTCG GCGTGTCCTT CGCCGCGATC
GGCTACCTGG TCACCTTCTA CGCCGGCGCG ATGGCGCTCG GCGGCCCGCT GCTGACCACC
GCCCTGCTCC GCGTGCCGCG CAAGAACGCC CTGCTCGGCC TGATCGCGCT GTTCGTGGTC
GGCCAGGTCA TCGGCGCCCT GGCGCCGGGC TATGCGGTGA TGGTCGCGGC GCGACTGGTC
ACCGCGGTCG CCGCCGCGGC CTTCTTCGGC GTGGCGCTGA CCGCCTGCGC CGAACTGGTC
GAAGGCAACC AGTTCGGCCG CGCGTCGTCG CTGGTGCTCG GTGGCCTGAT GGTCGGAACC
GTGCTTGGCC TGCCCGTCGC CACCTGGCTG GGCGAATGGT ACGGCTGGCG CGCGAGCTTC
TTCGCGGTGG CGCTGGTGGC GGTGCTGGTC GGCCTGCTGG TGTTGCAGCT GATGCCGGCG
ATCCCGGGGT CGGCGGGCAG CGGCTCGCTG CGCGAGGAAC TGAAGGTGTT CAGGAACGCC
CATCTATGGT GGGTCTACGC CACCAGCCTA CTGCTGATCG GCGCCACCTT CGCCGGCTTC
ACCTATTTCG TGCCGATCCT CACCGAGGTC AGCGGCTTCT CCGCCTCGAC CGTACCGCTG
CTGCTGGTGG TCTACGGCCT GGCGACGCTG GTGGGCAACA ACATCGTCGG CCGCCTGGCC
GACCGCCATA CCATCGCGGT CCTGGCCTTC GGCCTGCTGG CGGCCATCGC CGCGATGGTG
GCCTTCGCCC TGTTCGGACA GGTTCCGGCG GTAGCGGTGG CGGCGCTGGT GGTGATCGGC
CTGACCGGGG TGTCGATGAA CCCAGCGCTG GTGACCCGCG GCGCACGTGT CGGCCATAAC
AACATGCTGG TCAACTCGGT GCACACTGCC TGCATCATGC TCGGCGTGAT GGCCGGTTCC
TGGATCGGCG GCCTGGGCAT CGCCGGCGGA TTCGGCCTGC AGGGCGCGCT CTGGGTCGGC
GCGGCCCTCG GGGTGCTGGC GCTGCTGACC CTGCTGCCGG AGCTGCGCTT CGCCCGCGCC
CCGGTGGGCG GGGCGCTGGG CCGCTGA
 
Protein sequence
MPLIVYVLGA AIFALTTSEY MVAGLMPALA AEFGVSFAAI GYLVTFYAGA MALGGPLLTT 
ALLRVPRKNA LLGLIALFVV GQVIGALAPG YAVMVAARLV TAVAAAAFFG VALTACAELV
EGNQFGRASS LVLGGLMVGT VLGLPVATWL GEWYGWRASF FAVALVAVLV GLLVLQLMPA
IPGSAGSGSL REELKVFRNA HLWWVYATSL LLIGATFAGF TYFVPILTEV SGFSASTVPL
LLVVYGLATL VGNNIVGRLA DRHTIAVLAF GLLAAIAAMV AFALFGQVPA VAVAALVVIG
LTGVSMNPAL VTRGARVGHN NMLVNSVHTA CIMLGVMAGS WIGGLGIAGG FGLQGALWVG
AALGVLALLT LLPELRFARA PVGGALGR