| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_20890 |
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| Symbol | rfaD |
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| ID | 4384596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1800156 |
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| End bp | 1801154 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639324228 |
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| Product | ADP-L-glycero-D-mannoheptose 6-epimerase |
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| Protein accession | YP_789815 |
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| Protein GI | 116051352 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCATGA GCATCATCGT CACCGGCGCC GCCGGCTTCA TCGGCAGCAA TCTGCTGCAG
GCGCTGAACC GGCGCGGCGA GACCGACATC ATCGCGGTGG ACGATCTCAC CGACGGCGAG
CAGTTCCGCA ACCTGGCGGA CGCCGATATC GCCGACTACC TGGACCAGAA CGACTTCCTC
GAGCGTTACG CCCGCGGCGA CTTCGGCACG GTCCGCGCGC TGTTCCACCA GGGTGCCTGC
GCCAGCACCC TGGAAAGCAA TGGCCGCTAC ATGATGGAGA ACAACTACCG CTACAGTTGC
CGCCTGCTGG AAAGCAGCCT GGAACTCGGC GTGCCGTTCC TCTACGCCTC GTCGGCGGCG
GTCTACGGAG CCGGCCGGAC CTTCCGCGAG GCGCGCCAGT ACGAGCGGCC GCTGAACGTC
TACGGCTATT CCAAGTTCCT CTTCGACCAG CGTGTGCGGC GGGCGCTGCC GCAGGCGCGC
AGCCAGGTGG TCGGCCTGCG TTACTTCAAC GTCTACGGGC CGCGCGAGGA ACACAAGGGG
CGGATGGCCT CGGTGGCCTA CCACTGCTAC CAGCAATTGC GCCGCGACGG GCGGGTCGAA
CTGTTCGGCG AACACGGTGG CTTCCCGCCC GGCGGCCACC TGCGCGACTT TGTCGCGGTG
GAGGACGTGG CGCGGGTCAA CCTGCATTTC TTCGATCATC CGCAGCGTTC GGGAATCTTC
AACCTCGGCA GCGGCCAGGC GCGGACCTTC AACGAGGTCG CCCTGGCGGT GATCAATAGC
GTCCGCGCCA ATGCCGACCA GCCGCCCCTG TCGCTGCAGC AGGCGGTGGA AAGCGGCCTG
CTCGGCTACC GCGAGTTCCC CGAGTCGCTG CGGGCGCGCT ACCAGAGCCA CACCTGCGCC
GACCTGGAGC TGCTGCGCGA GGCGGGCTAC CGCGACGATT TCCAGAGCCT GGAAGAGGGC
GTCGCCGGCT ACTGCCGCTG GCTGGCGCGC AGCGCCTGA
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| Protein sequence | MPMSIIVTGA AGFIGSNLLQ ALNRRGETDI IAVDDLTDGE QFRNLADADI ADYLDQNDFL
ERYARGDFGT VRALFHQGAC ASTLESNGRY MMENNYRYSC RLLESSLELG VPFLYASSAA
VYGAGRTFRE ARQYERPLNV YGYSKFLFDQ RVRRALPQAR SQVVGLRYFN VYGPREEHKG
RMASVAYHCY QQLRRDGRVE LFGEHGGFPP GGHLRDFVAV EDVARVNLHF FDHPQRSGIF
NLGSGQARTF NEVALAVINS VRANADQPPL SLQQAVESGL LGYREFPESL RARYQSHTCA
DLELLREAGY RDDFQSLEEG VAGYCRWLAR SA
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