| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_20610 |
|---|
| Symbol | lecB |
|---|
| ID | 4382274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1773860 |
|---|
| End bp | 1774207 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639324204 |
|---|
| Product | fucose-binding lectin PA-IIL |
|---|
| Protein accession | YP_789791 |
|---|
| Protein GI | 116051376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00000165307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.65706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC AAGGAGTGTT CACCCTTCCC GCCAACACCC AGTTCGGCGT CACCGCCTTC
GCCAACTCGG CCGGAACCCA GACGGTGAAC GTGCAGGTCA ACAACGAAAC CGTCGCGACC
TTCACCGGGC AAAGCACCAA CAACGCCATC ATCGGCAGCA AGGTGCTCAA CTCGGGCGGC
GGCGGCAAGG TGCAGATCCT GGTCAGCGTC AATGGCCGCT CTTCGGATCT GGTTTCGGCG
CAGGTGATCC TGGCCAATGA GCTGAACTTC GCCCTGGTCG GCTCTGAAGA CAGCACCGAC
AACGACTACA ACGACGCCGT CGTGGTGATC AACTGGCCGC TCGGCTAG
|
|---|
| Protein sequence | MATQGVFTLP ANTQFGVTAF ANSAGTQTVN VQVNNETVAT FTGQSTNNAI IGSKVLNSGG
GGKVQILVSV NGRSSDLVSA QVILANELNF ALVGSEDSTD NDYNDAVVVI NWPLG
|
|---|
| |