Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20520 |
Symbol | |
ID | 4385747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1763497 |
End bp | 1766208 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324196 |
Product | hypothetical protein |
Protein accession | YP_789783 |
Protein GI | 116051384 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000061545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.488224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC CCCCATACTT CCCCCGTCTC GGCGCCCTCG CCCTGGCCTG CGCCCTGGCC CTGCCCGCGC AGGCGGCCGA GCGCGCCTGG AGCTACAGCT ACAACGCCCT CGGCCTGATC GAGCGCGCCG ACGGTCCGCG CACCGATGTG CAGGACGTCA CCCTCTATGC CTACGACAGT CGCGGCAACC TGACCCAGGT GACCAACGCC CTCGGCCAGG TCACCCGCCT CGGCGACTAT GACGAGCGCG GCAAGCCCGG CAGCATCACC GATGCCAACG GCGTCACCAG CAGCCTCGCC TACACCGGCG TCGACGGCTG GCTGGCCTCC GTCAGCACCG CCGGCAGCAC CACCCGCTTC GACTACGACG CGGTCGGCCA GATCACCCGC GTCACCCGCG GCGACGGCAG TTGGCTGAGC TACGAATACG ACGACGCACG GCGGCTGGTG GCGATCGGCA ACAACCTCGG CGAACGCCTC GAATACGACG TCGACACCAA GGGCAATCGC ACCGCCCAGC GCATCAAGGA CGCCAGCGGC AGCCTGGTGC GCCAGCAGCA ATGGGCCTAC GACGAGCTTG GCCGGCTGCT CCGTGCGGTC GGCGCCGGCG GCCAGACACG CAGCTTCGCC TACGACCTCA ACGACAATCC GGTCGGCGAA ACCAACCCGC GCCAGTTCGC CCACAGCCAG GCCTTCGACG CCCTCGACCG GCTGGTCGGC CAGAGCGATC CTCTCGGCGG CAAGACCCAA CTCGCCTACG ACGCCCAGGA CAACCTCACC GAGGTCAAGG ACCCGCGCGG CGTCACCACC CGCTACGAAT ACGACGGCCT CGGCAACCTG ACCCGACTGG TCAGCCCGGA CAGCGGCACC ACCACCTTCG AGCACGACGC CGCCGGCAAC GTCATCCGCC GCACCGACGC TCGCGGTGCG GTCACCGAGT ATCGCTACGA CGCCCTCAAT CGCCTGATCG AGCGCCACTC GCCGAGCGAC CCGAGCCTCG ACGTACAGTA CCGCTACGAC CTCACCGCCG ACGGCAACCA GGGCATCGGC CGCCTGGGCG CCATCGAAGG TGCCCGCGAC AGCCTGGTGT ACCGCTACGA CGAGCGCGGC AACCTGGTCG AGCAGGTACG CAGCATCCGC CTCGACCAGC AGACCCTGCT CGACCGCGTG ACCTACCGCT ACGACGCGGC CAACCAACTG CTGGAGATCG GCTACCCCTC CGGCCTCGCC ATCGGCTACC CGCGCAACGC CGGCGGCCAG GTCGCCAGCG TGACCCTGGC AGTAGGCGAC AAGGCGCCGA GCACCCTGGT CGGGCAGATC GCCTACCTGC CCTTCGGCCC GCTGCTGCGC CTGACCTGGG GCAACGGCAT CACTCTCAGC CGCGAGTACG ACCAGGACTA CCAACTGCTG CGGCAGAAGG TCGGCCCCTG GCAGAGCGAC TACCAGCACG ATGCCAATGG CAATATCCAG CAGCACCACC ACAGCCTCTG GGGCACCCTG GACTACCAGT ACGACCCGCT GGACCGCCTG ACCGAGGAAC GCGGCGTCCA GGGCGGGCGC AGCTATGCCT ACGACGCGGT CGGCAACCGC ACCCAACGCA GCGACAACCC CGCCTCAGGC GGCACCGCCA GCAGCCAGGA CTACCAGTAC GCGCCCGACA GCAACCGATT GACCGCCATC GGCGCGCAAG CGGTGACCAG CGACGCCGCC GGCAACCTCA CCCAGGACCG CGCCGCGCGC AAACTGGCCT ACGACGCCCA GGGCCGCCTG CAAAGCGTCA GCCTCGACGG CCAGCAGGTC GCCGAATACC GCTACAACGC CCTCGGCCAG CGCATCGTCA AGCTCACCCC CGAGAGCATC ACCACCTACC TCTACGGTCC CGACGGCCAG TTGCTCGGCG AAGCCGAACA CGACGGCAGC GGCCGGAAAC TGCGAGCCCA GTACTACCTG TGGCTGGACA GCCTGCCGCT GGCCACCATC GACGCCGACT ACGACGCCCA GGGCAAGGTC GGCAACCCGA CCCTGCTCTA CCTCCATGGC GACCACCTCG ACACCCCGCG CCTGGCCACC GACGCCAGCG GCCAGATCGC CTGGCAGTGG CAGTCCGACG CCTTCGGCCG CGGCGAAGCG CTGAGCCAGG GCAGCACCCA GGTCAACCTG CGCTTCCCCG GGCAGTACTA CGATGCGGAA AGCGGGCTGC ACTACAACTA CTTCCGCGAC TATGATCCGG AGACTGGGCG GTATGTGGAG AGTGATCCGA TTGGGTTGGC AGGAGGACTT AATACATATG TATATGTCGA AGGAAACCCC CTTGCCTATG TAGATGAATG GGGGCATTCA AAAACCAATG GAAAGCATGC AAACAAATCA AGCCCAATGA CAGTGGGCGA CTTTAACAAG AACTCTGACC CTGCCAAGAT ACAAGAAGCA ATCAGAGAGG CCGAAACCAA TGGGAAAAAC GCACATGCAA AAGCACTCAA GGGACTACTG AAAGTAATTA AACGTACTAA AAGCCTAACC CCGCATGGTG TTATAGAGGA CATCCTGGAA AATCTATGTG AATCCCATCC TGAGGAACCG GCCTGCAAAA TATTTACTCC ACCTCCCGCT ATAGTTTGGT GCAAAGAAGG AGAAACTTCG CCTCCCTTAC CCCCTATGTC CAGTTTAAGT TCCCCGGACC GACCAGAAAT TATAGATCTT GGCCAGCTAT AA
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Protein sequence | MRIPPYFPRL GALALACALA LPAQAAERAW SYSYNALGLI ERADGPRTDV QDVTLYAYDS RGNLTQVTNA LGQVTRLGDY DERGKPGSIT DANGVTSSLA YTGVDGWLAS VSTAGSTTRF DYDAVGQITR VTRGDGSWLS YEYDDARRLV AIGNNLGERL EYDVDTKGNR TAQRIKDASG SLVRQQQWAY DELGRLLRAV GAGGQTRSFA YDLNDNPVGE TNPRQFAHSQ AFDALDRLVG QSDPLGGKTQ LAYDAQDNLT EVKDPRGVTT RYEYDGLGNL TRLVSPDSGT TTFEHDAAGN VIRRTDARGA VTEYRYDALN RLIERHSPSD PSLDVQYRYD LTADGNQGIG RLGAIEGARD SLVYRYDERG NLVEQVRSIR LDQQTLLDRV TYRYDAANQL LEIGYPSGLA IGYPRNAGGQ VASVTLAVGD KAPSTLVGQI AYLPFGPLLR LTWGNGITLS REYDQDYQLL RQKVGPWQSD YQHDANGNIQ QHHHSLWGTL DYQYDPLDRL TEERGVQGGR SYAYDAVGNR TQRSDNPASG GTASSQDYQY APDSNRLTAI GAQAVTSDAA GNLTQDRAAR KLAYDAQGRL QSVSLDGQQV AEYRYNALGQ RIVKLTPESI TTYLYGPDGQ LLGEAEHDGS GRKLRAQYYL WLDSLPLATI DADYDAQGKV GNPTLLYLHG DHLDTPRLAT DASGQIAWQW QSDAFGRGEA LSQGSTQVNL RFPGQYYDAE SGLHYNYFRD YDPETGRYVE SDPIGLAGGL NTYVYVEGNP LAYVDEWGHS KTNGKHANKS SPMTVGDFNK NSDPAKIQEA IREAETNGKN AHAKALKGLL KVIKRTKSLT PHGVIEDILE NLCESHPEEP ACKIFTPPPA IVWCKEGETS PPLPPMSSLS SPDRPEIIDL GQL
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