Gene PA14_20190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20190 
SymbolnosD 
ID4381357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1739071 
End bp1740357 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content70% 
IMG OID639324168 
Productcopper ABC transporter periplasmic substrate-binding protein 
Protein accessionYP_789756 
Protein GI116051411 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00197549 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.794755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCACT CAGCGCGGTC GATGGCCGGG CGCCGGGCGG GACCGCTCCT CGCCCTGCTC 
CTGCTCGGCC TCGCCACGGC CCGCGCGGAG CCGGTCGACG GCCTGCCGCT GCGGGCCGAC
GGCGATGGCC GCTGGAGCCT GGCGGCGGGC CGCTACGCCG GCAACTTCGT CATCGACCGA
CCGCTGCACC TGCGCTGCGA GGCCGGCGCC GAACTGGACG GCGGCGGCCA CGGCAGCCTG
CTGACCCTGA CCAGCCCCGG GATCACCGTC GAGGGCTGCC GGCTGCGCAA CTGGGGGCGC
AACCTGACCG AACTCGACGC CGCGATCTTC GTCGGCAAGG CCGCCAGCGG CGCCGTGATC
CGCGGCAACG ACCTGCGCGG CGCGGGCTTC GGCGTCTGGC TCGACGCCAC GGCGGGCGCG
CAGGTGCTCG ACAACCGCAT CGAGGGCGAC GAAAGCGTGC GCTCCCAGGA TCGCGGCAAC
GGCATCCACC TCTATGCGGT GAAGGACGCC CTGGTCCGCG GCAACCGGGT CAGCCACACC
CGCGACGGGG TCTACATCGA CACTTCCAAC GACAGCAGCA TCGAAGCCAA CCGCTTCGAG
GAGCTGCGCT ACGGCGTGCA CTACATGTTC ACCCACAACA GCCGGGTGAT CGACAACCTG
ACCCGGCGCA CCCGCACCGG CTACGCGCTG ATGCAGAGCC GCAAGCTGAC CGTGACCGGC
AACCGCTCCA TCGACGACGA GAACTACGGC ATCCTGATGA ACTACATCAC CTACTCGACC
CTGGCCGGCA ACCGCGTCGA GGGCGTGCGC AGCGGCAGCA CCGGTGACGC GATGATCTCC
GGCGCCGAGG GCAAGGCGCT GTTCATCTAC AACTCGCTGT TCAACCGCAT CGAAGGCAAC
AGCTTCGCCG ACAGCGCCCT GGGCATCCAC CTCACCGCCG GCTCGGAGGA CAATCGCATC
GCCGGCAACG CCTTCATAGG CAACCGCCAG CAGGTCAAGT ACGTCGCCAA CCGCGAGCAG
GAGTGGTCCG CCGACGGCCG CGGCAACTAC TGGAGCGACT ACCTGGGCTG GGACCGCGAC
GACGACGGTC TCGGCGACGT CGCCTACGAG CCCAACGACA ACGTCGACCG GCTGATCTGG
CTGTACCCGC AGGTACGCCT GCTGTTGAAC AGCCCGAGCA TCGAGCTGTT GCGCTGGGTC
CAGCGCGCCT TCCCGGTGGT GCGCTCGCCC GGCGTGCGCG ACAGCCATCC GCTGATGCGG
ATGCCCGCCG CGGAGCCGAG GCCATGA
 
Protein sequence
MIHSARSMAG RRAGPLLALL LLGLATARAE PVDGLPLRAD GDGRWSLAAG RYAGNFVIDR 
PLHLRCEAGA ELDGGGHGSL LTLTSPGITV EGCRLRNWGR NLTELDAAIF VGKAASGAVI
RGNDLRGAGF GVWLDATAGA QVLDNRIEGD ESVRSQDRGN GIHLYAVKDA LVRGNRVSHT
RDGVYIDTSN DSSIEANRFE ELRYGVHYMF THNSRVIDNL TRRTRTGYAL MQSRKLTVTG
NRSIDDENYG ILMNYITYST LAGNRVEGVR SGSTGDAMIS GAEGKALFIY NSLFNRIEGN
SFADSALGIH LTAGSEDNRI AGNAFIGNRQ QVKYVANREQ EWSADGRGNY WSDYLGWDRD
DDGLGDVAYE PNDNVDRLIW LYPQVRLLLN SPSIELLRWV QRAFPVVRSP GVRDSHPLMR
MPAAEPRP