Gene PA14_20100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20100 
Symbol 
ID4381365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1732031 
End bp1733203 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content68% 
IMG OID639324160 
Producthypothetical protein 
Protein accessionYP_789748 
Protein GI116051419 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.944312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGG CCGCGCTGAA GCGCAACGCC AGCCGTTTCG TCCAGGCGTT CAACACCGAG 
ACGCGGATCG CCTGCCGCAG CTGGACCATC CACTGGCTCG GCTGGTGCTG GCCGCTGCTG
CTGTTCGGCG TGATCAGCGG CGTCTACCAG GCCGGTACCC TGCTGGACAT GCCGCTGGCG
GTGGTCGACA AGGACCATAG CCAGCTGTCG CGCAAGCTGA TCCGCGACCT CGACGCGACC
TCCCACGCCC AGGTGATCAC CGTTCCCGCC GGCGTCCAGG AGGGGCTCGA CGCGATCCGT
CGGGCCGATG CCTACGCCTT GCTCTACATC CCGCCGGACT TCGAGGCCGA CGTGCTCGGC
GGGCGCGCGC CGAAGGCCGA GCTGTACTAC AACGCGCTGC TGTATTCGGC CGGCTACGCC
GCCACCCAGG ACTTCTCGGC GCTGGTCGCC AGCCTCAACG GCGAATTGCG TCCGCGCCTG
GCCGCCGGGA TGCCGGCGGC GCTGCCGCAC CTGGCGAGCA TCAGCGTGTC CTACGACAGC
CTGTTCAATG CCAGCGGCAA CTACATCTAT TACCAGCAGT TCGCCGCCAT CGTGCACCTG
CTACAGCTGT TCGTGATCGT CACCATGGTC CATGTGCTGG CCCGCGAGGC GCCGGAACTG
CGCGCCTCCT CGCCGCACAT CCTGCGGGCC AAGGCCCTCG GCGTACGCCT GGTGGGCAAA
CTGGCGCCCT ACACGCTGCT GTTCACCGCG CTGCTGATGC TGGAAATCTT CCTGCTGGTG
GCGTTCTCCG GCGCGCGCAT CAACGGCAGC CCGCTGGCGA TGCTGATGAT CACGCTGTTC
TACGTGATCG CCGCGCAGAG CGTCGGGCTG GTGCTGTTCG TCTTCACCGC CAACCGCTTC
ACCGCCTATT CGCTGGTGGG CATGCTGATC GGCGTCGCCC AGACCTACTC GGGAGTGCTG
ATCCCGGAAC TGGCGATGCC GACCCTGGCG CGGGTGATCG CCGAGGCCGA GCCGCTGACC
CACACCCTGC ACGGCCTGTT CGACCAGTTC CTGCGCCAGG CGCCGCCCAG TTCGGCGCTC
TACACCTGCG CCAAGCTGGC GCTGTACCCG CTGATCGCCT ACATGATCGC CAAGATGCGC
CTGCGCAGCC GCCTGGACCT GAGCCCGATA TGA
 
Protein sequence
MAWAALKRNA SRFVQAFNTE TRIACRSWTI HWLGWCWPLL LFGVISGVYQ AGTLLDMPLA 
VVDKDHSQLS RKLIRDLDAT SHAQVITVPA GVQEGLDAIR RADAYALLYI PPDFEADVLG
GRAPKAELYY NALLYSAGYA ATQDFSALVA SLNGELRPRL AAGMPAALPH LASISVSYDS
LFNASGNYIY YQQFAAIVHL LQLFVIVTMV HVLAREAPEL RASSPHILRA KALGVRLVGK
LAPYTLLFTA LLMLEIFLLV AFSGARINGS PLAMLMITLF YVIAAQSVGL VLFVFTANRF
TAYSLVGMLI GVAQTYSGVL IPELAMPTLA RVIAEAEPLT HTLHGLFDQF LRQAPPSSAL
YTCAKLALYP LIAYMIAKMR LRSRLDLSPI