Gene PA14_20080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20080 
Symbol 
ID4381366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1731056 
End bp1732027 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID639324159 
Producthypothetical protein 
Protein accessionYP_789747 
Protein GI116051420 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAT GGAAACTCTT TACCCCGTTG CTGATCCTCG CGATCGTCGC CATCACCCTC 
TACCTGCGCC TGCACAATCC GCCCCTGCTG TTGCAGGGCG AGGCGGACGC CACCAACGTC
ATCGTTTCCT CCAAGGCCAA GGGCCGGGTC CAGGTGCTGC ACGTGCGGCG CGGCGACGAG
GTGAAGCAGG GCGACCTGCT GATCAGCCTC GACAGCCCCG AGCTGGAAGC CCAGCTCGAT
GCCCTGCACG CGGCGCGCAA CCAGGCCCAG GCGCAGCTCG ACGAGTCGCT CCACGGTACC
CGCGAGGAGA GCATCCGCGC GCTCAAGGCC AGCCTGGCAC AGGCCGAGGC CGAGTTGCGC
AACGCCGAGT CGGATTTCCA GCGCAACCAG CAGATGGTCG AGCGCGGCTT CCTCTCGCGG
ACCCAGTTCG ACCTCTCGCG GCGTGAGCGC GATGTCGCCC GCGACCGCGT CGCCGAGGCG
CGGGCCAATC TCGACGAAGG CCTCAAGGGC GACCGCGAGG AGCGCCGCCA GGCGTTGCAG
GCCGCGGTGC GCCGGGCCGA CGCGCAGATC GCCGAGCTAC AGGCGCAGAT CGACGACCTG
CAGGTGCGCG CGCCGGTCAA CGGCGAGGTC GGGCCGATCC CCGCCGAACA GGGCGAACTG
ATCAACGCCT ACAGTCCGCT GCTGACGCTG GTGCGGCTGG ACGACAGCTA CTTTGTCTTC
AACCTGCGCG AGGACATCCT GGCCAAGGTG CGCAAGGGCG ACCGCATCGT CATGCAAGTG
CCCGGCCTGG GCGGCGCCGA GGTCGAGACC GAGCTGCGCT ACATCGCCCC GCTGGGTGAT
TTCTCGACCA GGCGCGCGAC CCGCGCCACC GGCGATTTCG ACCTGAAGAC CTTCGAGACC
CGCTTCTACC CGTTGCAGCC GACACCCGGC CTGCGCCCGG GCATGAGCGC GCTGTGGCGC
TGGACGAACT GA
 
Protein sequence
MKGWKLFTPL LILAIVAITL YLRLHNPPLL LQGEADATNV IVSSKAKGRV QVLHVRRGDE 
VKQGDLLISL DSPELEAQLD ALHAARNQAQ AQLDESLHGT REESIRALKA SLAQAEAELR
NAESDFQRNQ QMVERGFLSR TQFDLSRRER DVARDRVAEA RANLDEGLKG DREERRQALQ
AAVRRADAQI AELQAQIDDL QVRAPVNGEV GPIPAEQGEL INAYSPLLTL VRLDDSYFVF
NLREDILAKV RKGDRIVMQV PGLGGAEVET ELRYIAPLGD FSTRRATRAT GDFDLKTFET
RFYPLQPTPG LRPGMSALWR WTN