Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20080 |
Symbol | |
ID | 4381366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1731056 |
End bp | 1732027 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324159 |
Product | hypothetical protein |
Protein accession | YP_789747 |
Protein GI | 116051420 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGAT GGAAACTCTT TACCCCGTTG CTGATCCTCG CGATCGTCGC CATCACCCTC TACCTGCGCC TGCACAATCC GCCCCTGCTG TTGCAGGGCG AGGCGGACGC CACCAACGTC ATCGTTTCCT CCAAGGCCAA GGGCCGGGTC CAGGTGCTGC ACGTGCGGCG CGGCGACGAG GTGAAGCAGG GCGACCTGCT GATCAGCCTC GACAGCCCCG AGCTGGAAGC CCAGCTCGAT GCCCTGCACG CGGCGCGCAA CCAGGCCCAG GCGCAGCTCG ACGAGTCGCT CCACGGTACC CGCGAGGAGA GCATCCGCGC GCTCAAGGCC AGCCTGGCAC AGGCCGAGGC CGAGTTGCGC AACGCCGAGT CGGATTTCCA GCGCAACCAG CAGATGGTCG AGCGCGGCTT CCTCTCGCGG ACCCAGTTCG ACCTCTCGCG GCGTGAGCGC GATGTCGCCC GCGACCGCGT CGCCGAGGCG CGGGCCAATC TCGACGAAGG CCTCAAGGGC GACCGCGAGG AGCGCCGCCA GGCGTTGCAG GCCGCGGTGC GCCGGGCCGA CGCGCAGATC GCCGAGCTAC AGGCGCAGAT CGACGACCTG CAGGTGCGCG CGCCGGTCAA CGGCGAGGTC GGGCCGATCC CCGCCGAACA GGGCGAACTG ATCAACGCCT ACAGTCCGCT GCTGACGCTG GTGCGGCTGG ACGACAGCTA CTTTGTCTTC AACCTGCGCG AGGACATCCT GGCCAAGGTG CGCAAGGGCG ACCGCATCGT CATGCAAGTG CCCGGCCTGG GCGGCGCCGA GGTCGAGACC GAGCTGCGCT ACATCGCCCC GCTGGGTGAT TTCTCGACCA GGCGCGCGAC CCGCGCCACC GGCGATTTCG ACCTGAAGAC CTTCGAGACC CGCTTCTACC CGTTGCAGCC GACACCCGGC CTGCGCCCGG GCATGAGCGC GCTGTGGCGC TGGACGAACT GA
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Protein sequence | MKGWKLFTPL LILAIVAITL YLRLHNPPLL LQGEADATNV IVSSKAKGRV QVLHVRRGDE VKQGDLLISL DSPELEAQLD ALHAARNQAQ AQLDESLHGT REESIRALKA SLAQAEAELR NAESDFQRNQ QMVERGFLSR TQFDLSRRER DVARDRVAEA RANLDEGLKG DREERRQALQ AAVRRADAQI AELQAQIDDL QVRAPVNGEV GPIPAEQGEL INAYSPLLTL VRLDDSYFVF NLREDILAKV RKGDRIVMQV PGLGGAEVET ELRYIAPLGD FSTRRATRAT GDFDLKTFET RFYPLQPTPG LRPGMSALWR WTN
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