Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_19990 |
Symbol | |
ID | 4381375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1720161 |
End bp | 1720676 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324150 |
Product | RNA polymerase ECF-subfamily sigma-70 factor |
Protein accession | YP_789738 |
Protein GI | 116051429 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0223745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATGCGC CGTTGGCGGA GCAGGATCTC AAGGCACTGT TTCTCAGGCA TGCCCGGCAG TTGCAGTCGT ATCTGTTGCG CAAGACCCGC GATCCGCACC TGGCGGCGGA CCTGGCGCAG GAAAGCTTCC TGCGCCTGGC CGAGCAGCGG CACAAGGAGC CGATCGAGCA TGTCGACGCC TATCTCTACC GCACCGCGCA CAACCTCACC ATCGACCATT ACCGGCAGGA ACGGCGGCGC CGCACCGAGA CCCGCCCCAA CGACGACCTC GCCGGGTTCG TCGCCGACCA GCCCGGCCCC GAGGAGTCCG CGGTGGATGC CGATGCGCTT GCCCGCCTGC GCGAGATAGT CGCCGAACTG CCGCCGCGCA CCCGTGAGAT CTTCCGTCTC AACCGTCTGG AGGGGCTGAC CCATGCCGAG GTGGCGAGAC GCCTGGAAAT CTCCGATAGC TCGGTGCAGA AGCACCTGGC CCGCGCCCTG GCCCATGTGA TGCAGGCACT CGAGGATTCC CGCTGA
|
Protein sequence | MDAPLAEQDL KALFLRHARQ LQSYLLRKTR DPHLAADLAQ ESFLRLAEQR HKEPIEHVDA YLYRTAHNLT IDHYRQERRR RTETRPNDDL AGFVADQPGP EESAVDADAL ARLREIVAEL PPRTREIFRL NRLEGLTHAE VARRLEISDS SVQKHLARAL AHVMQALEDS R
|
| |