Gene PA14_19990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_19990 
Symbol 
ID4381375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1720161 
End bp1720676 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID639324150 
ProductRNA polymerase ECF-subfamily sigma-70 factor 
Protein accessionYP_789738 
Protein GI116051429 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0223745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCGC CGTTGGCGGA GCAGGATCTC AAGGCACTGT TTCTCAGGCA TGCCCGGCAG 
TTGCAGTCGT ATCTGTTGCG CAAGACCCGC GATCCGCACC TGGCGGCGGA CCTGGCGCAG
GAAAGCTTCC TGCGCCTGGC CGAGCAGCGG CACAAGGAGC CGATCGAGCA TGTCGACGCC
TATCTCTACC GCACCGCGCA CAACCTCACC ATCGACCATT ACCGGCAGGA ACGGCGGCGC
CGCACCGAGA CCCGCCCCAA CGACGACCTC GCCGGGTTCG TCGCCGACCA GCCCGGCCCC
GAGGAGTCCG CGGTGGATGC CGATGCGCTT GCCCGCCTGC GCGAGATAGT CGCCGAACTG
CCGCCGCGCA CCCGTGAGAT CTTCCGTCTC AACCGTCTGG AGGGGCTGAC CCATGCCGAG
GTGGCGAGAC GCCTGGAAAT CTCCGATAGC TCGGTGCAGA AGCACCTGGC CCGCGCCCTG
GCCCATGTGA TGCAGGCACT CGAGGATTCC CGCTGA
 
Protein sequence
MDAPLAEQDL KALFLRHARQ LQSYLLRKTR DPHLAADLAQ ESFLRLAEQR HKEPIEHVDA 
YLYRTAHNLT IDHYRQERRR RTETRPNDDL AGFVADQPGP EESAVDADAL ARLREIVAEL
PPRTREIFRL NRLEGLTHAE VARRLEISDS SVQKHLARAL AHVMQALEDS R