Gene PA14_19800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_19800 
Symbol 
ID4381837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1705590 
End bp1706333 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID639324136 
ProductAraC family transcriptional regulator 
Protein accessionYP_789724 
Protein GI116051443 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACC ACCTCAGTTG GAAGCACCGC GACATCGACG CGGTGATGGC GCTCTATCAT 
CCCGAGGTCG AATACAACGA CTTCTTCCAG AACCGCCGGA TGCGCCTGGC CGATCTTCGC
GAGTACGTCG AGGCGACCAT GCCCAAGGGC CCCGACGAGT CGCTGGAGCA CACCGACCGT
ATCCGCTTCG ACGGCGATAC CGCCTTCATC CAGTACCGCC TGCGGGTGAC CCTCAGCGGC
CGCCTGGCTT CGTTCCGCGC CAGCGAGGCG ATCACCGTGC GCGACGGCCT GATCTGGCGC
ATCAACGAAT ACGCCTCGCT GGTCCACGAA AGCGGCGGCG GAGCCCAGGC CGGCGGCGAC
GGCCGGCCGC CGGCCAGCCG CCTGGGGCTT TCGGCCAAGC AGCTGAGCCT GCTGGCGCGC
GACCTGGAGC ACTACTTCCA GCAGGCCCAG CCCTATCTCG ATCCGGACCT GGACCTGACC
CAGGTGGCCA ACGCCACCGG TTATACGCGC AACCAGATTT CCTACCTGCT CAACCAGGTG
CTCGGCCTGA GCTTCTACCA GTACGTCAAC CAGACCCGCC TGCAACACCT GCTCGGCCAG
CTTTCCGGCG AGCTGCCCGG ACGGGTCGAC GAACTGGCCT TCGCCGCCGG CTTCAATTCG
CTGTCGGCCT TCTACCGCTG CTTCCGCCAG CACACCGGCC AGTCTCCGCG CGAATACCTG
AAGCGCCTGT CGTCGCGCCG CTGA
 
Protein sequence
MRYHLSWKHR DIDAVMALYH PEVEYNDFFQ NRRMRLADLR EYVEATMPKG PDESLEHTDR 
IRFDGDTAFI QYRLRVTLSG RLASFRASEA ITVRDGLIWR INEYASLVHE SGGGAQAGGD
GRPPASRLGL SAKQLSLLAR DLEHYFQQAQ PYLDPDLDLT QVANATGYTR NQISYLLNQV
LGLSFYQYVN QTRLQHLLGQ LSGELPGRVD ELAFAAGFNS LSAFYRCFRQ HTGQSPREYL
KRLSSRR