Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_19800 |
Symbol | |
ID | 4381837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1705590 |
End bp | 1706333 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324136 |
Product | AraC family transcriptional regulator |
Protein accession | YP_789724 |
Protein GI | 116051443 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACC ACCTCAGTTG GAAGCACCGC GACATCGACG CGGTGATGGC GCTCTATCAT CCCGAGGTCG AATACAACGA CTTCTTCCAG AACCGCCGGA TGCGCCTGGC CGATCTTCGC GAGTACGTCG AGGCGACCAT GCCCAAGGGC CCCGACGAGT CGCTGGAGCA CACCGACCGT ATCCGCTTCG ACGGCGATAC CGCCTTCATC CAGTACCGCC TGCGGGTGAC CCTCAGCGGC CGCCTGGCTT CGTTCCGCGC CAGCGAGGCG ATCACCGTGC GCGACGGCCT GATCTGGCGC ATCAACGAAT ACGCCTCGCT GGTCCACGAA AGCGGCGGCG GAGCCCAGGC CGGCGGCGAC GGCCGGCCGC CGGCCAGCCG CCTGGGGCTT TCGGCCAAGC AGCTGAGCCT GCTGGCGCGC GACCTGGAGC ACTACTTCCA GCAGGCCCAG CCCTATCTCG ATCCGGACCT GGACCTGACC CAGGTGGCCA ACGCCACCGG TTATACGCGC AACCAGATTT CCTACCTGCT CAACCAGGTG CTCGGCCTGA GCTTCTACCA GTACGTCAAC CAGACCCGCC TGCAACACCT GCTCGGCCAG CTTTCCGGCG AGCTGCCCGG ACGGGTCGAC GAACTGGCCT TCGCCGCCGG CTTCAATTCG CTGTCGGCCT TCTACCGCTG CTTCCGCCAG CACACCGGCC AGTCTCCGCG CGAATACCTG AAGCGCCTGT CGTCGCGCCG CTGA
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Protein sequence | MRYHLSWKHR DIDAVMALYH PEVEYNDFFQ NRRMRLADLR EYVEATMPKG PDESLEHTDR IRFDGDTAFI QYRLRVTLSG RLASFRASEA ITVRDGLIWR INEYASLVHE SGGGAQAGGD GRPPASRLGL SAKQLSLLAR DLEHYFQQAQ PYLDPDLDLT QVANATGYTR NQISYLLNQV LGLSFYQYVN QTRLQHLLGQ LSGELPGRVD ELAFAAGFNS LSAFYRCFRQ HTGQSPREYL KRLSSRR
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