| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_19540 |
|---|
| Symbol | |
|---|
| ID | 4385231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1689249 |
|---|
| End bp | 1690220 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639324114 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789702 |
|---|
| Protein GI | 116051465 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCA TCGCTTTGCG TCGTGGACTG GCGGCCCTGC TGGTGGCGGC CCTGTCCTAC
GGCGTCCAGG CCGACGAGAA GTCGGCCAAC ACCCTGCGGA TCGGTTATCA GAAATACGGC
ACCCTGGTCC TGCTCAAGGC CCGCGGCACC CTGGAGAAAC GTCTCGCCGA AGACGGCGTG
AAGGTGCAAT GGACCGAGTT TCCCGGCGGC CCGCAATTGC TCGAGGGACT CAATGTCGGC
AGCATCGACT TCGGCGTGAC CGGGGAAACC CCGCCGGTAT TCGCCCAGGC CGCCGGCGCC
GACCTGCTCT ACGTGGCCTA CGAACCGCCG GCGCCGACCA GCGAGGCGAT CCTCCTGCCG
AAGGACTCGC CGATTCGTTC GGTGGCCGAG CTGAAGGGCA GGAAAGTCGC CCTGAACAAG
GGCTCCAACG TGCATTACCT GTTGGTCCGC GCCCTCGAGC AGGCCGGCCT GAAGTACAGC
GACATCCAAC CCGTCTACCT GCCGCCGGCC GACGCCCGCG CCGCCTTCGA GCGCCACAGC
GTCGACGCCT GGGTGATCTG GGACCCCTAC CAGGCCGCCG CCGAGAAGCA GTTGTCCGCG
CGGGTCCTGG TGGATGGTCG CGAGCTGGTC GACAACCACC AGTTCTACCT CGCCACCCGG
ACTTACGCGC AACGGCATCC GCAGGTGCTC GACAAGCTGG TGGACGAGAT CCGCCAGGTC
GGCGACTGGT CGCGGGCCAA CCCGCAGCAG GTGACCGAGC AGGTCGCGCC GCTGCTCGGG
TTGCCCGCCG ACATCACCCT GACCGCGGTG AAGCGCCAGG GCTACGGCGC GCAGTTGATC
ACCCCGGCGG TGGTCGAGGC GCAGCAGAAG ATCGCCGACA CCTTCACCCA GCTGAAGCTG
ATTCCCAAAC CGCTGAGCAT CAAGGACGTG ATCTGGACGC CATCGGCCGG CAAGGTCGCC
AGCGCCCCCT GA
|
|---|
| Protein sequence | MRTIALRRGL AALLVAALSY GVQADEKSAN TLRIGYQKYG TLVLLKARGT LEKRLAEDGV
KVQWTEFPGG PQLLEGLNVG SIDFGVTGET PPVFAQAAGA DLLYVAYEPP APTSEAILLP
KDSPIRSVAE LKGRKVALNK GSNVHYLLVR ALEQAGLKYS DIQPVYLPPA DARAAFERHS
VDAWVIWDPY QAAAEKQLSA RVLVDGRELV DNHQFYLATR TYAQRHPQVL DKLVDEIRQV
GDWSRANPQQ VTEQVAPLLG LPADITLTAV KRQGYGAQLI TPAVVEAQQK IADTFTQLKL
IPKPLSIKDV IWTPSAGKVA SAP
|
|---|
| |