| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_19400 |
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| Symbol | mnmC |
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| ID | 4385242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1676774 |
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| End bp | 1678738 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639324103 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_789691 |
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| Protein GI | 116051476 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0825831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACT TCCAGCATGC CCAGCTCGAC TGGGACGAAA ACGGCCAGCC GCTATCCCGC
GCCTTCGGCG ACGTATATTT TTCCCGGCAT TCCGGGCTCA ACGAGACGCG CCATGTGTTC
CTCGCCACCA ACCGCCTGGC CGAGCGCTTC GCCGCGCTGG GCGACGGCGA GGTGCTGTGT
ATCGGTGAGA CCGGCTTCGG CACCGGACTG AACTTCCTCT GCGCCTGGCA GCTGTTCGAG
CAGGTCGCGC CGGCCGGCGC GCGCCTGGAG TTCGTCAGCG TGGAGAAATT CCCCCTCGCC
GCCGCCGACC TGCGCCGCGC CCTGGCGCTA TGGCCGGAAC TGGCGCCCTG GAGCGAGGCC
CTGCTGGGCC AGTACCTTGC CGTGCACCCG GGCTTCCAGC GCCTGGCGTT CGCGGGCGGA
AGGATCGGCC TGACCCTGCT GCTGGGCGAT GCCCTGGAGT GCCTGCCGCA GCTCGACGCG
CGGGTCGACG CCTGGTTCCT CGACGGCTTC GCCCCGGCGA AGAACCCGGA CATGTGGTCG
CCCGCGCTGT TCGCCGAACT GGCGCGACTG TCGGCGCCGC AGGCGACCCT GGGCACCTTC
ACCAGCGCCG GTTTCGTCCG CCGCGGGCTG ATCGAGGCCG GTTTCGCCAT GCAACGGGTA
CCGGGCTACG GGCAGAAGCG CGAGATGCTC GGCGGCACCT ACCAGGGGCC GCCGGCGAAC
GCCGGCAAGC CCTGGTACGC ACGCCCCGCG CCCCACGCCG GGCGCCGCGC GGCACTGGTG
GTCGGCGGCG GCCTGGCCGG CTGCGCCAGC GCCGCCAGCC TCGCCGCGCG CGGCTGGCAG
GTGACCCTGA TCGAACGCCA TCCCGGCCTC GCCCGGGAAG CCTCGGGCAA CCCCCAGGGC
GTGCTCTACC TGAAACTCTC GGCCCACGGC ACGCCGCTGT CGCGCCTGGT GCTCAGCGGC
TTCGGCCATA CCCGCCGGCT GCTCGAACGC CTGCGGCGCG GCCACGACTG GGACGCCTGC
GGCGTACTGC AACTGGCCTT CGACGCCAAG GAAGCGCAAC GCCAGGCGCA ACTGGCCGCA
GCCTTCCCCG CCGACCTGCT GCACGGCCTG GACCGCGAGC AGGCCGAGCG CCTCGCCGGC
GTCGCCCTGC CCGCCGGCGG CCTGTTCTAT CCCGAAGCCG GCTGGGTCCA TCCGCCCGCG
CTGTGCCAGG CCCTGGCCGC CACCCCCGGG ATCACCCTGC TGAGCGGCCG GGCGGTACGC
TTGCGCCGCG AGGGCGACGA CTGGTGCGCC TACGCCGGCG ACGAATGCCT GGCCCGCGCG
CCACTCGCGA TCCTCGCCAC CGCCGCCGAC ATCCGCGACT TCCCGCCCGC CGCCGAGCTG
CCGCTGAAGC GCATTCGCGG GCAGGTCACC CGCCTGCCGG CCACCCCGCA AAGCCGGGCG
CTGCGCACCG TGGTCTGCGC CGAGGGCTAC GTCGCACCGC CGCGTGGCGA CGAACACACC
CTCGGCGCCA GCTTCGACTT CAAGAGCGAA GACCTGGCGC CGACCCTCGC CGAACACCAG
GGCAACCTCG AACTGCTGCG GGAGATATCC CCCGACCTGT TGCAGCGCCT GGGCGCCGAC
GACCTGCCGC TGGAGCGCCT GGAAGGCCGC GCGGCGTTCC GCTGCACCAG CCCCGACTAC
CTGCCCCTGG TAGGCCCGCT GGCCGAGCGC GCGGCCTTCG ACGAGGCCTA CGCGGTGCTC
GCCCGTGACG CCCGCCAGGT GCCGGAGCGG GCCTGCCCCT GGCTGCCAGG CCTGTACCTG
AACAGCGGCC ACGGCTCGCG CGGGCTGATC AGCGCGCCGC TGTCCGGCGA ACTGCTGGCG
GCGTGGATCT GCGGCGAGCC GCTGCCGCTG CCGCGCGCGG TGGCCGAGGC CTGCCACCCG
AACCGCTTCC TGCTGCGCGA CCTGGTGCGT GGGCAGCGCG GCTGA
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| Protein sequence | MSDFQHAQLD WDENGQPLSR AFGDVYFSRH SGLNETRHVF LATNRLAERF AALGDGEVLC
IGETGFGTGL NFLCAWQLFE QVAPAGARLE FVSVEKFPLA AADLRRALAL WPELAPWSEA
LLGQYLAVHP GFQRLAFAGG RIGLTLLLGD ALECLPQLDA RVDAWFLDGF APAKNPDMWS
PALFAELARL SAPQATLGTF TSAGFVRRGL IEAGFAMQRV PGYGQKREML GGTYQGPPAN
AGKPWYARPA PHAGRRAALV VGGGLAGCAS AASLAARGWQ VTLIERHPGL AREASGNPQG
VLYLKLSAHG TPLSRLVLSG FGHTRRLLER LRRGHDWDAC GVLQLAFDAK EAQRQAQLAA
AFPADLLHGL DREQAERLAG VALPAGGLFY PEAGWVHPPA LCQALAATPG ITLLSGRAVR
LRREGDDWCA YAGDECLARA PLAILATAAD IRDFPPAAEL PLKRIRGQVT RLPATPQSRA
LRTVVCAEGY VAPPRGDEHT LGASFDFKSE DLAPTLAEHQ GNLELLREIS PDLLQRLGAD
DLPLERLEGR AAFRCTSPDY LPLVGPLAER AAFDEAYAVL ARDARQVPER ACPWLPGLYL
NSGHGSRGLI SAPLSGELLA AWICGEPLPL PRAVAEACHP NRFLLRDLVR GQRG
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