Gene PA14_19290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_19290 
Symbol 
ID4381432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1662267 
End bp1663607 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content67% 
IMG OID639324093 
Productputative ATP-dependent RNA helicase 
Protein accessionYP_789681 
Protein GI116051486 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGGT CTCCCTTGTT CAGCCAATTT CCCCTCCACG AACGCCTGCT GAAGGCACTG 
GAAAGCCTGT CCTTCAGCGA GCCGACGCCG GTCCAGGCCG CGGCCATTCC CAAGGCGCTG
GAGGGGCACG ACCTGCGGGT CACGGCGCAG ACCGGCAGCG GCAAGACCGC GGCCTTCCTG
CTGCCGCTGC TGCACCGCCT GCTGGCCGAG GACAAGCCGC GCTCCCTGGC GCGCGCGCTG
ATCCTCCTGC CGACCCGCGA GCTGGCCCAG CAGACCCTCA AGGAAGTCGA GCGCTTCGCC
CAGTTCACCT TCATCAAGGC CTGCCTGATC ACTGGCGGCG AGGACTTCAA GGTGCAGGGC
GCGCGCCTGC GCAAGAACCC GGAGATCATC ATCGGCACCC CCGGCCGCCT GCTCGAGCAG
CGCAACGCCG GCAACCTGCC GTTGCAGGAC ATCGAGGTGC TGGTGCTGGA CGAGGCCGAC
CGCATGCTCG ACATGGGCTT CGCCGACGAC GTGCTGGCCC TGGCCAATGC CTGCCCGGCC
GAGCGCCAGA CCCTGCTGTT CTCCGCCACC CACAGCGGCG CCGGGTTGAA CAAGGTGATA
GCCGAGGTGC TGCGCGAGCC GCAAGTGCTG CGCCTGAACC AGGTCGGCGA GCTGAACGAG
AACGTCCGCC AGCAGGTCAT CACCGCCGAC GACGTGGCGC ACAAGGAACA GTTGCTGCAA
TGGCTGCTGA GCAACGAGAC CTACACCAAG GCCATCGTTT TCACCAATAC CCGGGTCTCC
GCCGATCGCC TGACCGGGCG GCTGATCGCC AACCAGCACA AGGTCTTCGT CCTGCATGGC
GAGAAGGACC AGAAGGACCG CAAGCTGGCC ATCGAACGCC TGAAGCAGGG CGCGGTGAAG
ATCCTCGTCG CCACCGACGT CGCCGCACGC GGCCTGGACG TCGAAGGCCT GGACCTGGTG
ATCAACTTCG ACATGCCGCG CAGCGGCGAC GAGTACGTGC ACCGCATCGG CCGCACCGGT
CGCGCCGGCG CCGAGGGCCT GGCGATCTCG CTGATCTGCC ATGGCGACTG GAACCTGATG
TCGAGCGTCG AACGCTACCT CAAGCAGAAC TTCGAACGAC GCAACATCAA GGAACTGAAG
GCCGCCTACC AGGGGCCGAA GAAGCTCAAG GCCTCGGGCA AGGCCGCCGG CAGCAAGAAG
AAAAAGCAGG ACAGGAAGGG CACCGCCGCC AAGCCCGCGG CCAAGCGCAA GCCCGCCGCG
CGGCCGAAGG CCGGGCCGTC GGCGGTGGTC AGCGCCGACG GCATGGCGCC GCTCAAGCGC
AAGAAGCCGA CGGCGGAGTG A
 
Protein sequence
MPRSPLFSQF PLHERLLKAL ESLSFSEPTP VQAAAIPKAL EGHDLRVTAQ TGSGKTAAFL 
LPLLHRLLAE DKPRSLARAL ILLPTRELAQ QTLKEVERFA QFTFIKACLI TGGEDFKVQG
ARLRKNPEII IGTPGRLLEQ RNAGNLPLQD IEVLVLDEAD RMLDMGFADD VLALANACPA
ERQTLLFSAT HSGAGLNKVI AEVLREPQVL RLNQVGELNE NVRQQVITAD DVAHKEQLLQ
WLLSNETYTK AIVFTNTRVS ADRLTGRLIA NQHKVFVLHG EKDQKDRKLA IERLKQGAVK
ILVATDVAAR GLDVEGLDLV INFDMPRSGD EYVHRIGRTG RAGAEGLAIS LICHGDWNLM
SSVERYLKQN FERRNIKELK AAYQGPKKLK ASGKAAGSKK KKQDRKGTAA KPAAKRKPAA
RPKAGPSAVV SADGMAPLKR KKPTAE