Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_19170 |
Symbol | |
ID | 4381437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1655333 |
End bp | 1655929 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639324087 |
Product | hypothetical protein |
Protein accession | YP_789675 |
Protein GI | 116051491 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.545233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCAC CCTTTTTGAC ATGCCTGTCT GTAGGCTTCG CGGCCCTTCT GGCCGCCCTC TCGACGCCCA GCCTGGCTTC CAACCAGGTC ACCCACACCT TCAAGCCGTC GAAGAATTCC ACCCTGTCGC CCAGCCGGGT CGTCAGCACC CGCCAGTCCG CCAACCGCTC GGTGGTCGCG GCCGCCGCTT CCGAAGTCAC CGACCGCGCC TTCAGCATGA TCGGCACCCC CTACCGCTGG GGCGGCACCA CGCCGAAGAA AGGCTTCGAT TGCAGCGGCC TGGTCAACTA TGTGTTCCAG GACGTCGATG ACGTCGACCT GCCGCGGACC GCCCGCGCCA TCTACAACAT GGACAACAAC AAGGTCTCCC GCGGCAAGCT GCAACCGGGC GACCTGGTGT TCTTCCGGAT CCGCAGCCGC AGCGTCGACC ACGTCGGCAT CTACGTCGGC AACGACCGCT TCGTGCACGC GCCGCGGCGC GGCAAGAAGG TCCGCGTCTC CGACCTCAAC AGCAGCTACT GGAAACGCCA CTACCTGGCC GGCAAGCGCA TCCTGCCGAC CACCCTCGCC CAGGTCGAAA GCACCCGCAA GCGCTGA
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Protein sequence | MRSPFLTCLS VGFAALLAAL STPSLASNQV THTFKPSKNS TLSPSRVVST RQSANRSVVA AAASEVTDRA FSMIGTPYRW GGTTPKKGFD CSGLVNYVFQ DVDDVDLPRT ARAIYNMDNN KVSRGKLQPG DLVFFRIRSR SVDHVGIYVG NDRFVHAPRR GKKVRVSDLN SSYWKRHYLA GKRILPTTLA QVESTRKR
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