| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18780 |
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| Symbol | |
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| ID | 4381487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1615483 |
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| End bp | 1618644 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639324055 |
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| Product | putative RND efflux transporter |
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| Protein accession | YP_789643 |
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| Protein GI | 116051521 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0445074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.109166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCC CACGCTTCTT CATCGATAGG CCGATCTTCG CCATCGTTCT TTCGGTGCTG
ATGATGATCG GAGGCATCGT TTCGTTCTTC CAGTTGCCGC TGAGCGAATA CCCGGCGGTG
ACGCCGCCGA CCGTGCAGGT GACCACCGCC TATCCCGGCG CCAACCCCGA CGTGATCGCG
CAGACGGTGG CGACGCCGCT GGAGCAGGCG ATCACCGGGG TCGAGGGGAT GCTGTACATG
TCCTCGCAGT CGGCCACCGA CGGGCGAATG ATCCTGACCA TCACCTTCGA CCAGCACATC
GATCCCGACA TGGCCCAGAT CCAGGTGCAG AACCGGGTCT CGCGGGTGCT CTCGCGCCTG
CCCGACGAGG TGCAGCGGCA GGGCGTGGTC ACCCAGAAGA CCTCGCCGGA CATCCTCATG
GTGGTGCACC TGCTGTCGCC GGAACAACGC TACGACCCGC TGTACATCTC GAACTACGCC
TACCTCCAGG TACGCGACGA ACTGCTGCGC CTGCCGGGGA TCAGCGATGT GGTGGTGTGG
GGCGCCGGCG AATACAGCAT GCGCCTGTGG CTCGACCCCG ACCTGATCGC CGCGCGCGGG
CTGACGGCGG GCGAGGTGAT CGCCGCGGTT CGCGAGCAGA ACGTCCAGGT GGCGGCCGGC
GCCGTCGGCC AGGCGCCGGA CTCCACCGCG GCCTTCCAGG TCACGGTGAA TACCCTCGGG
CGCCTGAGCG ACGAAGAGCA GTTCGGCGAC ATCATCGTCC GCACCGGCGC CGACGGCCAG
GTGACGCGCC TGCGCGACGT CGCGCGGATC GAGATGGGCG GCGATGCCTA TGCGCTGCGC
AGCCTGCTGG ACGGCGAGCC GGCGGTGGCC TTGCAGATCG TCCAGAGCCC CGGAGCCAAC
GCGCTGGATA CCGCCGAGGC GGTGCGTGCC ACCGTGGCGA GGCTCGAAGG CAACTTCCCG
GCCGGCCTGA GCGCGCGCAT CGCCTACGAC CCGACGGTGT TCGTCCGCGC TTCGTTGCAG
ACCGTGGCCA CCACCCTGCT GGAGGCGATC CTGCTGGTCG TGGTGGTGGT GGTGCTGTTC
CTGCGTAGCT GGCGTGCTTC GCTGATTCCG CTGATGGCCG TGCCGGTCTC GCTGGTCGGC
ACCTTCGCCA TCATGCATCT GATGGGTTTC TCGCTGAATA CCCTGTCGCT GTTCGGCCTG
GTGCTGTCGA TCGGCATCGT CGTCGATGAC GCCATCGTGG TGGTGGAAAA CGTCGAGCGC
CACATCGAGA ACGGCGAGCC GCCGCTCCAG GCCGCGCGGC GTGCGATGGA CGAGGTCACC
GGACCGATCA TGGCGATTAC CTCGGTGCTG GCGGCAGTGT TCATCCCCAC GGCCTTTCTC
AGTGGTCTGC AGGGCGAGTT CTATCGTCAG TTCGCCCTGA CCATCGCCAT CTCCACCATC
CTGTCGGCGC TCAACTCGCT GACCCTCAGC CCGGCCCTGG CGGGCCTGCT GTTGCGTCCG
CGGCCGGCCG GAGATGCGGT GGCGGGGCGC TTCCAGCGAC TGCTCCAGGT CCTCGGCCGA
CCGTTGCGAA ATGCCCCCGA GGCCTACGGC AACGCGGTGC GCAAGGTGGT GCGGGTGAGC
GGCCTGGCCC TGGTGGTGTA TGGGGGCCTG CTTGGCCTGA CCTGGGTCGG TTTCCAGGCG
GTGCCGCCGG GCTTCGTGCC GATGCAGGAC AAGTACTATC TGGTCGGCAT CGCCCAGTTG
CCGAACGGAG CGTCGCTGGA GCGTACCGAA GCGGTGGTCA GGCAGATGTC CCGGATCGGC
CTCGACGAGC CGGGGGTGGA GAGCGTCGTG GCCTTCCCGG GCCTGTCGGT GAACGGCTTC
GTCAACGTGC CGAACGCCGC GGTCATGTTC TTCATGCTCG ACCCGTTCGA ATCGCGCACC
TCCGCCGATC TCGGCGCGCT GGCCATCGCC GGGCGCCTGC AAGCCAGGTT CGCCAGCATT
CCCGACGGCT TCCTCGGGGT CTTCCCGCCG CCGCCGGTAC CGGGGCTGGG AACCATCGGC
GGCTTCAAGA TGCAGGTCGA GGATCGCGGC GGCGCCGGGC TGGAAGCCCT GGCCAGGCAG
ACCCAGGTGC TGATGATGAA GGCCACTGAG TCCGGCCAGC TCGGGGGCTT GATGACCAGC
TTCGATATCA ATGCCCCGCA GCTCGAGGTG GTGGTCGACC GCACCAAGGT GAAGAGCCAG
GGCGTTCGCC TGGCCGATGT GTTCGAGGCA TTGCAGGTCT ACCTCGGCTC GCTGTACATC
AACGACTTCA ACCGCTTCGG GCGCACCTAC AAGGTCACTG CCCAGGCCGA TGCGCCGCAC
CGCATGCAGG CCGAAGCCAT CGGGCGCCTG CAGGTACGCA ATGCCGCCGG GGCGATGTTG
CCGCTGTCCT CGTTCGTCAC CGTGACGCCC AGCTCCGGTC CCGACCGGGT GATCCACTAC
AACGGCTATC CGTCGGCCGA TATCAGCGGC GGCGCGCTTC CCGGCGTCAG TTCGGGACAG
GCGGTGGCGT TGATGGAGCG CCTGGCCGGC GAAGTGCTGC CCGAGGGCAT GACCTTCGAA
TGGACCGACC TGACCTACCA GCAGAAGCTG GCCGGTAACA GCGCGCTGTT CATCTTCCCG
CTGTGCGTGC TGCTGGCCTA CCTGATCCTC GCCGCGCAGT ACAACAGCTG GCTGTTGCCG
CTGGCGGTCC TGCTGATCGT GCCGATGTGC CTGCTCAGCG CGATCGCCGG GGTGTGGCTG
GTGGGCGGCG ACAACAACGT GTTCGTCCAG ATCGGGCTGG TGGTGCTGGT CGGCCTGGCG
GCGAAGAACG CGATCCTGAT CGTCGAGTTC GCCCGCACGC TGGAGGCCGA GGGCGCCCGT
GCGCTGGAGG CGGTGGTCGA GGCTTGCCGC CTGCGCCTGC GGCCGATCCT GATGACCTCG
CTGGCGTTCA TCGCCGGCGT GGTGCCGTTG GTCATGGCCA GCGGCGCCGG AGCGGAAATG
CGCCAGGCCA TGGGCGTCGC GGTATTCGCC GGGATGCTCG GGGTGACGCT GTTCGGCCTG
TTCCTCACGC CAGTGTTCTA CGTACTGGTA CGGGCACTGG CGGCGCGCCT GGAGCGACGC
GCCGGCGGCA GCCTGGCGCA TCTGGAGGGA GGCCGTCCAT GA
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| Protein sequence | MTFPRFFIDR PIFAIVLSVL MMIGGIVSFF QLPLSEYPAV TPPTVQVTTA YPGANPDVIA
QTVATPLEQA ITGVEGMLYM SSQSATDGRM ILTITFDQHI DPDMAQIQVQ NRVSRVLSRL
PDEVQRQGVV TQKTSPDILM VVHLLSPEQR YDPLYISNYA YLQVRDELLR LPGISDVVVW
GAGEYSMRLW LDPDLIAARG LTAGEVIAAV REQNVQVAAG AVGQAPDSTA AFQVTVNTLG
RLSDEEQFGD IIVRTGADGQ VTRLRDVARI EMGGDAYALR SLLDGEPAVA LQIVQSPGAN
ALDTAEAVRA TVARLEGNFP AGLSARIAYD PTVFVRASLQ TVATTLLEAI LLVVVVVVLF
LRSWRASLIP LMAVPVSLVG TFAIMHLMGF SLNTLSLFGL VLSIGIVVDD AIVVVENVER
HIENGEPPLQ AARRAMDEVT GPIMAITSVL AAVFIPTAFL SGLQGEFYRQ FALTIAISTI
LSALNSLTLS PALAGLLLRP RPAGDAVAGR FQRLLQVLGR PLRNAPEAYG NAVRKVVRVS
GLALVVYGGL LGLTWVGFQA VPPGFVPMQD KYYLVGIAQL PNGASLERTE AVVRQMSRIG
LDEPGVESVV AFPGLSVNGF VNVPNAAVMF FMLDPFESRT SADLGALAIA GRLQARFASI
PDGFLGVFPP PPVPGLGTIG GFKMQVEDRG GAGLEALARQ TQVLMMKATE SGQLGGLMTS
FDINAPQLEV VVDRTKVKSQ GVRLADVFEA LQVYLGSLYI NDFNRFGRTY KVTAQADAPH
RMQAEAIGRL QVRNAAGAML PLSSFVTVTP SSGPDRVIHY NGYPSADISG GALPGVSSGQ
AVALMERLAG EVLPEGMTFE WTDLTYQQKL AGNSALFIFP LCVLLAYLIL AAQYNSWLLP
LAVLLIVPMC LLSAIAGVWL VGGDNNVFVQ IGLVVLVGLA AKNAILIVEF ARTLEAEGAR
ALEAVVEACR LRLRPILMTS LAFIAGVVPL VMASGAGAEM RQAMGVAVFA GMLGVTLFGL
FLTPVFYVLV RALAARLERR AGGSLAHLEG GRP
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