Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_18720 |
Symbol | |
ID | 4381491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1611174 |
End bp | 1612139 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639324051 |
Product | OmpA family membrane protein |
Protein accession | YP_789639 |
Protein GI | 116051525 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.746177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.130207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCCGC GCCTTCTTCT ATTGCCTTTC CTGCTCAGCA GCCTGCCGGC ACTGGCGGTG ACCTTCCAGA CGCGGCTGGA GAGCGTCGAG TGGAAGGTCG AAGGCGACCA GTTCGAATGC CGCCTGTCGC AGCCGGTGGC GAATTTCGGG GTCGGCGAGT TCGTCCGGCG TGCCGGCGAG CAGGCGACCT TCCGCCTGAA GCCCGAGGCC CAGTGGCTGG GGCGCGGGTC GGCGACCCTG CTGGCTGCCG CGCCGCCCTG GCGACCGGGA CAGGGCGACA TCAACCTTGG CCAGGTCAGC ATCGGCAGCG GCGAGGTGCC GTTCAACAGC AGCCAGCAAC AGGCCGGTCG GTTGCTCACC GGCCTGCTCG AGGGGCGCAG CCCGCTGGTC CGCCATCGCA CCTGGCAGGG CGATCGCCTG GAGGTGCGCC TGCTGCCGGC GCGCTTCGCC AGCGTCTACA GCCAGTACCA GGCCTGCATC GCCAAGCTGC TGCCGGTGAA CTTCGAGCAG GTCAAGCTGG CCCAGGTCGG CTTCCCCGAC GGCGGCACGG CGCTGAACGA CGTGGCGCGA GCCAAGCTGG ACATCATCCT GCAACTGCTC AAGGCCGATC CGAGCATCAA CCGGATCGAA CTCGACGGGC ACTCCGACAA CAGCGGCAAC CGCCTGACCA ACCGCGACCT GTCGCGCCGC CGCGCGCTGG CGGTGCAGGA GTACCTGAAG AGCAACGGGG TGCCGGAAAG CCAGATCAAC GTGCGCTTCT ACGGCGAGCG CTACCCGCTG GTGGCCAACA ACAGCGCCGC CAACCGTGCG CGCAACCGCC GGGTCACCGT GCACCTGTCG CGCGAGGCGG TGGTCGAGCC GGCGACGGAA GCGCCGAAGG CCGAGGACAA GCCGGCGCCG CCCGCGGCAG AACCTGCCGC ACCGAAGCCT CCGGCCGCCT CGCTTCAGGG AAAACCCACG GTTTGA
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Protein sequence | MQPRLLLLPF LLSSLPALAV TFQTRLESVE WKVEGDQFEC RLSQPVANFG VGEFVRRAGE QATFRLKPEA QWLGRGSATL LAAAPPWRPG QGDINLGQVS IGSGEVPFNS SQQQAGRLLT GLLEGRSPLV RHRTWQGDRL EVRLLPARFA SVYSQYQACI AKLLPVNFEQ VKLAQVGFPD GGTALNDVAR AKLDIILQLL KADPSINRIE LDGHSDNSGN RLTNRDLSRR RALAVQEYLK SNGVPESQIN VRFYGERYPL VANNSAANRA RNRRVTVHLS REAVVEPATE APKAEDKPAP PAAEPAAPKP PAASLQGKPT V
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